vis.immunr_public_statistics: Visualise sharing of clonotypes among samples

In immunarch: Bioinformatics Analysis of T-Cell and B-Cell Immune Repertoires

Visualise sharing of clonotypes among samples

Description

Visualise public clonotype frequencies.

Usage

## S3 method for class 'immunr_public_statistics'
vis(.data, ...)

Arguments

.data	Public repertoire - an output from the pubRep function.
...	Other arguments passsed directly to upset.

Value

A ggplot2 object.

Examples

data(immdata)
immdata$data <- lapply(immdata$data, head, 2000)
pr <- pubRep(immdata$data, .verbose = FALSE)
pubRepStatistics(pr) %>% vis()

immunarch documentation built on Dec. 28, 2022, 2:59 a.m.