annotate_anndata: Annotate an AnnData object from ImmunData (by barcode)
In immundata: A Unified Data Layer for Large-Scale Single-Cell, Spatial and Bulk Immunomics
View source: R/operations_external_annotate_anndatar.R
annotate_anndata R Documentation
Annotate an AnnData object from ImmunData (by barcode)
Description
Copy selected columns from idata$annotations to adata$obs, matching by
cell barcode (adata$obs_names).
Usage
annotate_anndata(idata, adata, cols)
Arguments
idata
An ImmunData object.
adata
An anndataR::AbstractAnnData object.
cols
Character vector with column names to transfer from
idata$annotations.
Value
The updated AnnData object.
immundata documentation built on April 4, 2026, 9:09 a.m.
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View source: R/operations_external_annotate_anndatar.R
| annotate_anndata | R Documentation |
Annotate an AnnData object from ImmunData (by barcode)
Description
Copy selected columns from idata$annotations to adata$obs, matching by
cell barcode (adata$obs_names).
Usage
annotate_anndata(idata, adata, cols)
Arguments
idata |
An ImmunData object. |
adata |
An anndataR::AbstractAnnData object. |
cols |
Character vector with column names to transfer from
|
Value
The updated AnnData object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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