API for inDAGO
A GUI for Dual and Bulk RNA-Sequencing Analysis

Global functions
BaseAverageQualityPlot Man page Source code
BaseAverageQualityPlotly Man page Source code
BaseCompositionAreaChartPlot Man page Source code
BaseCompositionLinePlot Man page Source code
BaseQualityBoxplotPlot Man page Source code
BulkAlignment Man page Source code
CombinedAlignment Man page Source code
CorrPlotHeatmap Man page Source code
CorrPlotHeatmaply Man page Source code
DEGsServerLogic Man page Source code
DEGsUserInterface Man page Source code
EDAServerLogic Man page Source code
EDAUserInterface Man page Source code
EdgerDEG Man page Source code
Filtering Man page Source code
FilteringServerLogic Man page Source code
FilteringUserInterface Man page Source code
GCcontentDistributionPlot Man page Source code
GCcontentDistributionPlotly Man page Source code
GetEdgerY Man page Source code
HeatmapExp Man page Source code
HeatmapExpPlotly Man page Source code
IndexingBulk Man page
IndexingBulkServerLogic Man page Source code
IndexingBulkUserInterface Man page Source code
IndexingComb Man page
IndexingCombinedServerLogic Man page Source code
IndexingCombinedUserInterface Man page Source code
IndexingSequentialParallel Man page
IndexingSequentialProgressive Man page Source code
IndexingSequentialServerLogic Man page Source code
IndexingSequentialUserInterface Man page Source code
QualityCheckAnalysis Man page Source code
Saturation Man page Source code
SequenceLengthDistributionPlot Man page Source code
SequenceLengthDistributionPlotly Man page Source code
SequentialAlignment Man page Source code
Summarization Man page Source code
SummarizationServerLogic Man page Source code
SummarizationUserInterface Man page Source code
UpSetPlot Man page Source code
UpsetjsPlot Man page Source code
WorkflowServerLogic Man page Source code
WorkflowUserInterface Man page Source code
barplotExp Man page Source code
boxplotExp Man page Source code
checkMetadata Man page Source code
counting_Reads Man page Source code
getDegMerged Man page Source code
inDAGO Man page Source code
mappingBulkServerLogic Man page Source code
mappingBulkUserInterface Man page Source code
mappingCombinedServerLogic Man page Source code
mappingCombinedUserInterface Man page Source code
mappingSequentialServerLogic Man page Source code
mappingSequentialUserInterface Man page Source code
mdsPlot Man page Source code
mdsPlottly Man page Source code
mdsinfo Man page Source code
pcaPlot Man page Source code
pcaPlottly Man page Source code
pcainfo Man page Source code
qualityControlServerLogic Man page Source code
qualityControlUserInterface Man page Source code
volcanoPlot Man page Source code
volcanoPlottly Man page Source code
inDAGO documentation built on Aug. 8, 2025, 7:47 p.m.