Files in incidental

Implements Empirical Bayes Incidence Curves

NEWS.md

MD5

README.md

NAMESPACE

DESCRIPTION

LICENSE

build/vignette.rds

data/spanish_flu_mortality.RData

data/covid_delay_dist.rda

data/covid_new_york_city.rda

data/spanish_flu_delay_distribution.RData

R/main.R R/incidental.R R/data_processing.R R/spline_model.R R/data.R R/model_fitting.R vignettes/incidental-tutorial.Rmd

vignettes/data/kansas_model_aic.rds

vignettes/data/kansas_model_hyperparameters.rds

vignettes/data/kansas_model_percent_thresh.rds

vignettes/data/model_df_list.rds

vignettes/data/kansas_model.rds

man/sample_laplace_log_incidence_poisson.Rd man/marg_loglike_poisson.Rd man/poisson_objective_post_cov_approx.Rd man/marg_loglike_poisson_grad.Rd man/regfun.Rd man/make_spline_basis.Rd man/poisson_objective.Rd man/incidental.Rd man/spanish_flu.Rd man/diff_trans.Rd man/spanish_flu_delay_dist.Rd man/train_and_validate.Rd man/train_val_split.Rd man/regfun_hess.Rd man/plot.incidence_spline_model.Rd man/poisson_objective_grad.Rd man/covid_new_york_city.Rd man/covid_delay_dist.Rd man/make_ar_extrap_samps.Rd man/compute_expected_cases.Rd man/fit_incidence.Rd man/compute_log_incidence.Rd man/incidence_to_df.Rd man/scan_spline_dof.Rd man/data_processing.Rd man/scan_spline_lam.Rd man/data_check.Rd man/front_zero_pad.Rd man/make_likelihood_matrix.Rd man/marg_loglike_poisson_fisher.Rd man/regfun_grad.Rd man/init_params.Rd tests/testthat.R tests/testthat/test-model_fitting.R tests/testthat/test-data_processing.R tests/testthat/test-spline_model.R

inst/doc/incidental-tutorial.html

inst/doc/incidental-tutorial.Rmd inst/doc/incidental-tutorial.R

incidental documentation built on Sept. 16, 2020, 5:07 p.m.