IdentifyStructure: Copy of the identifyStructure function from Tad Dallas...
In inpdfr: Analyse Text Documents Using Ecological Tools
View source: R/inpdfr_ANA_ECO_metacom_identifyStructure.R
IdentifyStructure R Documentation
Copy of the identifyStructure function from Tad Dallas metacom package.
Description
Identifies structure (or quasi-structure) and outputs a classification.
Usage
IdentifyStructure(metacom.obj)
Arguments
metacom.obj
The result of the 'Metacommunity' function, containing a
list of 4 elements; the empirical matrix being tested, and results for
coherence, turnover, and boundary clumping.
Details
Tad Dallas <tdallas@uga.edu> identifyStructure function no longer
maintained in metacom package. see https://github.com/taddallas/metacom.
This function was copy-pasted from version 1.4.4 of package metacom with
minor modification (fix warning: the condition has length > 1 and only the
first element will be used).
Value
Ouputs a classification of the metacommunity.
Note
Quasi structures, as well as 'random' and 'Gleasonian' structures,
may not strictly be discernable through the EMS approach, as they rely on
inferring a result from a non-significant test ('accepting the null'),
which is typically a bad idea.
inpdfr documentation built on Aug. 24, 2023, 9:09 a.m.
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View source: R/inpdfr_ANA_ECO_metacom_identifyStructure.R
| IdentifyStructure | R Documentation |
Copy of the identifyStructure function from Tad Dallas metacom package.
Description
Identifies structure (or quasi-structure) and outputs a classification.
Usage
IdentifyStructure(metacom.obj)
Arguments
metacom.obj |
The result of the 'Metacommunity' function, containing a list of 4 elements; the empirical matrix being tested, and results for coherence, turnover, and boundary clumping. |
Details
Tad Dallas <tdallas@uga.edu> identifyStructure function no longer maintained in metacom package. see https://github.com/taddallas/metacom. This function was copy-pasted from version 1.4.4 of package metacom with minor modification (fix warning: the condition has length > 1 and only the first element will be used).
Value
Ouputs a classification of the metacommunity.
Note
Quasi structures, as well as 'random' and 'Gleasonian' structures, may not strictly be discernable through the EMS approach, as they rely on inferring a result from a non-significant test ('accepting the null'), which is typically a bad idea.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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