human27pop_Qmat: A list of Q matrices of 27 human populations
In ipADMIXTURE: Iterative Pruning Population Admixture Inference Framework
Description
A dataset containing admixture ratios of 544 individuals from 27 human populations where the number of ancestors ranges from 2 to 12.
This dataset was the result of running ADMIXTURE software developed by Zhou, H., et al. (2011). A quasi-Newton acceleration for high-dimensional optimization algorithms. Statistics and computing, 21(2), 261-273.
on the 27-human-population dataset published by Xing, J., Watkins, W. S. et al. (2009). Fine-scaled human genetic structure revealed by SNP microarrays. Genome research, 19(5), 815-825.
Usage
1
Format
A list of Q matrices of 544 individuals from 27 human populations. There are 2-12 ancestors in the list.
- human27pop_Qmat
It is list of Q matrices that contains admixture ratios of 544 individuals from the 27 population human dataset.
human27pop_Qmat[[k]][i,j] is the admixture ratio of jth ancestor for ith individual in the (k+1)-ancestor Q matrix.
...
ipADMIXTURE documentation built on March 26, 2020, 7:38 p.m.
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Description
A dataset containing admixture ratios of 544 individuals from 27 human populations where the number of ancestors ranges from 2 to 12. This dataset was the result of running ADMIXTURE software developed by Zhou, H., et al. (2011). A quasi-Newton acceleration for high-dimensional optimization algorithms. Statistics and computing, 21(2), 261-273. on the 27-human-population dataset published by Xing, J., Watkins, W. S. et al. (2009). Fine-scaled human genetic structure revealed by SNP microarrays. Genome research, 19(5), 815-825.
Usage
1 |
Format
A list of Q matrices of 544 individuals from 27 human populations. There are 2-12 ancestors in the list.
- human27pop_Qmat
It is list of Q matrices that contains admixture ratios of 544 individuals from the 27 population human dataset.
human27pop_Qmat[[k]][i,j]is the admixture ratio of jth ancestor for ith individual in the (k+1)-ancestor Q matrix.
...
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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