iprior: Linear Regression using I-Priors
Version 0.6.4

Provides methods to perform and analyse I-prior regression models. Estimation is mainly done via an EM algorithm, but there is flexibility in using any optimiser.

Browse man pages Browse package API and functions Browse package files

AuthorHaziq Jamil [aut, cre]
Date of publication2017-02-14 12:19:16
MaintainerHaziq Jamil <haziq.jamil@gmail.com>
LicenseGPL (>= 3.0)
Version0.6.4
URL https://github.com/haziqjamil/iprior
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("iprior")

Man pages

datfbm: Simulated data to illustrate one-dimensional smoothing
fbmOptim: Find the Hurst coefficient of a FBM I-prior model
Hlam: Extract the scaled kernel matrix
hsb: High school and beyond dataset
hsbsmall: High school and beyond dataset
iprior: Fit an I-prior regression model
ipriorColPal: Colour palette for 'iprior' plots
ipriorOptim: Estimate an I-prior model using a combination of EM algorithm...
kernel: Reproducing kernels for the I-prior package
kernL: Load the kernel matrices of an I-prior model
logLik: Obtain the log-likelihood and deviance of an 'ipriorMod' or...
plot: Plots for 'ipriorMod' objects
pollution: Air pollution and mortality
predict: Predict for I-prior models.
progress: EM algorithm progression results for fitted 'ipriorMod'...
sigma: Obtain the standard deviation of the residuals 'sigma'
simdat: Random slopes model simulated data
slope: Recover the betas (slopes) of the regression curves
vary: Extract the variance of the responses

Functions

BlockA Source code
BlockC Source code
Canonical Man page
FBM Man page
Hlam Man page Man page Man page Source code
Hlam.ipriorKernel Man page Source code
Hlam.ipriorMod Man page Source code
Pearson Man page
QEstepLambda Source code
addZeroesIntr3Plus Source code
canPeaFBM Source code
datfbm Man page
decimalPlaces Source code
deviance Man page
deviance.ipriorKernel Man page Source code
deviance.ipriorMod Man page Source code
eigenCpp Source code
fastSquare Source code
fastVDiag Source code
fbmOptim Man page Source code
fbmOptimDeviance Source code
findH2 Source code
fisher Source code
fisherNew Source code
fn.H1 Source code
fn.H1a Source code
fn.H2 Source code
fn.H2a Source code
fn.H3 Source code
fn.H3a Source code
fnH1 Man page Source code
fnH2 Man page Source code
fnH3 Man page Source code
hMatList Source code
hlamFnMult Source code
hlamFnSingle Source code
hsb Man page
hsbsmall Man page
indxFn Source code
iprior Man page Source code
iprior.default Man page Source code
iprior.formula Man page Source code
iprior.ipriorKernel Man page Source code
iprior.ipriorMod Man page Source code
ipriorColPal Man page Source code
ipriorEM Source code
ipriorEMClosedForm Source code
ipriorEMOptim1 Source code
ipriorEMOptim2 Source code
ipriorEMnlm Source code
ipriorEMprettyIter Source code
ipriorEMprettyLoglik Source code
ipriorOptim Man page Source code
is.ipriorKernel Source code
is.ipriorMod Source code
is.ipriorX Source code
isCan Source code
isFBM Source code
isHOrd Source code
isPea Source code
kernL Man page Source code
kernL.default Source code
kernL.formula Man page Source code
kernel Man page
lambdaContract Source code
lambdaExpand Source code
lenHOrd Source code
linSolvInv Source code
logLik Man page
logLik.ipriorKernel Man page Source code
logLik.ipriorMod Man page Source code
logLikEM Source code
onUnload Source code
plot Man page
plot.ipriorMod Man page Source code
pollution Man page
predict Man page
predict.ipriorMod Man page Source code
print.ipriorKernel Source code
print.ipriorMod Source code
print.ipriorSummary Source code
progress Man page Source code
psiUpdate Source code
sigma Man page
sigma.ipriorMod Man page Source code
simdat Man page
slope Man page Source code
splitHOrd Source code
splitHurst Source code
splitKernel Source code
summary.ipriorMod Source code
testXForm Source code
triangIndex Source code
update.ipriorKernel Source code
vary Man page Source code
varyinv Source code
varyinv.ipriorKernel Source code
varyinv.ipriorMod Source code
whereInt Source code
whereOrd Source code
whichIntr3Plus Source code

Files

inst
inst/doc
inst/doc/iprior_vignette.html
inst/doc/kernel_matrix.R
inst/doc/iprior_vignette.Rmd
inst/doc/kernel_matrix.html
inst/doc/kernel_matrix.Rmd
inst/doc/iprior_vignette.R
tests
tests/testthat.R
tests/testthat
tests/testthat/test-2kernel_loader.R
tests/testthat/Rplots.pdf
tests/testthat/test-8iprior_plot.R
tests/testthat/test-9iprior_ot.R
tests/testthat/test-7iprior_methods.R
tests/testthat/test-1kernel.R
tests/testthat/test-4high_order.R
tests/testthat/test-3kernel_loader_names.R
tests/testthat/test-5mixed_kernel.R
tests/testthat/test-6iprior.R
src
src/fastSquare.cpp
src/fastVDiag.cpp
src/eigenCpp.cpp
src/RcppExports.cpp
NAMESPACE
NEWS.md
data
data/hsb.RData
data/hsbsmall.rda
data/datfbm.RData
data/simdat.RData
data/pollution.rda
R
R/Kernel_loader.R
R/ipriorOptim.R
R/Utilities.R
R/Data.R
R/fisher.R
R/logLik.R
R/varyinv.R
R/Kernel_functions.R
R/iprior.R
R/plot.R
R/predict.R
R/update.R
R/Hlam.R
R/progress.R
R/slope.R
R/RcppExports.R
R/vary.R
R/Namespace.R
R/fbmOptim.R
R/ipriorEM.R
R/ipriorEM_helper.R
vignettes
vignettes/iprior_vignette.Rmd
vignettes/kernel_matrix.Rmd
README.md
MD5
build
build/vignette.rds
DESCRIPTION
man
man/datfbm.Rd
man/hsb.Rd
man/progress.Rd
man/fbmOptim.Rd
man/ipriorColPal.Rd
man/Hlam.Rd
man/logLik.Rd
man/kernel.Rd
man/kernL.Rd
man/ipriorOptim.Rd
man/predict.Rd
man/iprior.Rd
man/simdat.Rd
man/slope.Rd
man/vary.Rd
man/sigma.Rd
man/pollution.Rd
man/plot.Rd
man/hsbsmall.Rd
iprior documentation built on May 20, 2017, 2:48 a.m.