Man pages for iq
Protein Quantification in Mass Spectrometry-Based Proteomics
| create_protein_list | Creating a list of matrices of fragment ion intensities for... |
| create_protein_table | Protein quantification for a list of proteins |
| extract_annotation | Protein annotation extraction |
| fast_MaxLFQ | The MaxLFQ algorithm |
| fast_preprocess | Data filtering and normalization |
| fast_read | Reading data from an input file |
| maxLFQ | The MaxLFQ algorithm for protein quantification |
| meanInt | The meanInt algorithm for protein quantification |
| median_polish | A wrapper for the R implementation of the median polish... |
| plot_protein | Plotting the underlying quantitative data for a protein |
| preprocess | Data preprocessing for protein quantification |
| process_long_format | Long format to a wide format table using the MaxLFQ algorithm |
| process_wide_format | Merging rows with identical values in a particular column in... |
| spikeins | An example dataset of 12 spike-in proteins |
| topN | The topN algorithm for protein quantification |
