Man pages for isatabr
Implementation for the ISA Abstract Model
| aFiles | Get and set aFiles. |
| assayTab-class | S4 Class assayTab, initialization methods |
| getAssayFileNames | Retrieve the Assay File Name(s) per Study from an ISA object. |
| getAssayTabs | Retrieve Assay Tables from an ISA object. |
| getStudyFileNames | Retrieve the Study Identifier(s) and Study File Name(s) from... |
| iContacts | Get and set iContacts. |
| iFileName | Get and set iFileName |
| invest | Get and set invest. |
| iPubs | Get and set iPubs. |
| ISA-class | S4 Class ISA, initialization method |
| isaPath | Get and set path |
| isatabr-package | isatabr package overview. |
| oSR | Get and set oSR |
| processAssay-methods | Process assay tab data |
| readISATab | Read an ISA-Tab dataset into an R object. |
| sAssays | Get and set sAssays. |
| sContacts | Get and set sContacts. |
| sDD | Get and set sDD. |
| sFacts | Get and set sFacts. |
| sFiles | Get and set sFiles. |
| sProts | Get and set sProts. |
| sPubs | Get and set sPubs. |
| study | Get and set study. |
| validISAObject | Check the validity of an object of class ISA. |
| writeISAtab | Write ISA-Tab object. |
