oSR: Get and set oSR

In isatabr: Implementation for the ISA Abstract Model

Get and set oSR

Description

Get and set the ontology Source Reference (oSR) data.frame in an object of ISA.

Usage

oSR(x)

oSR(x) <- value

## S4 method for signature 'ISA'
oSR(x)

## S4 replacement method for signature 'ISA'
oSR(x) <- value

Arguments

x	An object of class ISA.
value	A data.frame containing the ontology Source Reference information. data.frame in which at least the following columns are present: 'Term Source Name', 'Term Source File', 'Term Source Version', 'Term Source Description'.

Value

A data.frame containing the ontology Source Reference information.

The updated object of class ISA.

Examples

## Read example Atwell data set.
isaObject1 <- readISATab(path = file.path(system.file("extdata/Atwell",
                                          package = "isatabr")))

## Extract ontology Source Reference data.frame.
oSR(isaObject1)

isatabr documentation built on Aug. 19, 2022, 5:17 p.m.