Description Usage Arguments Details Value See Also
This function makes it easy to add additional file info (iso_get_file_info
) to isofile objects and data frames by a single left_join
or multiple sequential left_join
operations. The function provides a detailed summary of the information that was added unless quiet = TRUE
. Note that one-to-many joins are not permitted (and will fail with an informative error) since this would lead to likely unintended data duplication in the isofiles. However, one-to-one and many-to-one joins are fully supported and should cover all needed use cases for this function. Also note that for each join, only the new_file_info
rows that have defined non-NA, non-empty ("") values in all join_by
columns will be considered for the join and that only new_file_info
columns that do NOT already exist in ANY file information will be added. For changing the values of existing file information, please use iso_mutate_file_info
instead.
1 2 3 4 5 6 7 | ## S3 method for class 'iso_file_list'
iso_add_file_info(iso_files, new_file_info, ..., quiet = default(quiet))
## S3 method for class 'data.frame'
iso_add_file_info(df, new_file_info, ..., quiet = default(quiet))
iso_add_file_info(...)
|
iso_files |
collection of iso_file objects |
new_file_info |
data frame with new file information to add to the isofiles |
... |
each parameter specifies a set of |
quiet |
whether to display (quiet=FALSE) or silence (quiet = TRUE) information messages. Set parameter to overwrite global defaults for this function or set global defaults with calls to iso_turn_info_messages_on and iso_turn_info_messages_off |
df |
a data frame of iso files data retrieved by any of the data retrieval functions (e.g. |
Single left_join
: this is the most common use of this function and basically a simple left join operation (with some additional safety checks). Specify a single join_by
in the ...
, such as e.g. c("file_id")
to add additional file information joining by the file_id
column.
Multiple sequential left_join
: this use case is for applying a set of increasingly more specific join_by
rules. For example, ... = c("Identifier 1", "Identifier 2"), c("file_id")
would serve to first add one set of new file information for all isofiles based on their Identifier 1
and Identifier 2
columns and then overwrite the new information with more specific details for a subset of isofiles based on their file_id
column, all based on a single overview new_file_info
data frame. Basically, each set of join_by
conditions specified in ...
must describe a valid left_join
join_by
parameter to merge the new_file_info
with the existing file info. Each set of new_file_info
data can overwrite the previous join_by
matches such that the last set of join_by
column(s) provided in ...
will overwrite all previous matches for which it applies, even if they have already been a match for a previous column.
the original iso files or data frame with the new file info added in.
Other file_info operations:
iso_filter_files()
,
iso_mutate_file_info()
,
iso_parse_file_info()
,
iso_rename_file_info()
,
iso_select_file_info()
,
iso_set_file_root()
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