gamtabs: Convert model summary into Latex/HTML table for knitr/R...

In itsadug: Interpreting Time Series and Autocorrelated Data Using GAMMs

Convert model summary into Latex/HTML table for knitr/R Markdown reports.

Description

Convert model summary into Latex/HTML table for knitr/R Markdown reports.

Usage

gamtabs(
  model,
  caption = " ",
  label = "tab.gam",
  pnames = NA,
  snames = NA,
  ptab = NA,
  stab = NA,
  ...
)

Arguments

model	A GAM(M) model build in the package mgcv using gam or bam. Alternatively, a summary of a GAMM model could be provided.
caption	A string with the caption for the table.
label	A string for the label to refer to the table in the markdown document.
pnames	A vector with labels to relabel the rows in the parametric part of the summary.
snames	A vector with labels to relabel the rows in the smooth part of the summary.
ptab	A vector with labels to relabel the column names of the parametric summary.
stab	A vector with labels to relabel the column names of the smooth summary.
...	Optional additional arguments which are passed to xtable (see 'help(xtable)').

Value

A vector with color values.

Note

This function is useful for markdown documents using the package knitr to integrate R code with Latex and Sweave. This function requires the package xtable.

Author(s)

R. Harald Baayen

See Also

summary.gam, gam, bam.

Other Functions for model inspection: dispersion(), fvisgam(), inspect_random(), plot_data(), plot_parametric(), plot_smooth(), plot_topo(), pvisgam()

Examples

data(simdat)
## Not run: 
# Model with random effect and interactions:
m1 <- bam(Y ~ Group+te(Time, Trial, by=Group),
    data=simdat)
summary(m1)
gamtabs(m1, caption='Summary of m1')

## End(Not run)
# See for more examples:
vignette('inspect', package='itsadug')

itsadug documentation built on June 17, 2022, 5:05 p.m.