jointseg: Joint Segmentation of Multivariate (Copy Number) Signals

Methods for fast segmentation of multivariate signals into piecewise constant profiles and for generating realistic copy-number profiles. A typical application is the joint segmentation of total DNA copy numbers and allelic ratios obtained from Single Nucleotide Polymorphism (SNP) microarrays in cancer studies. The methods are described in Pierre-Jean, Rigaill and Neuvial (2015) <doi:10.1093/bib/bbu026>.

Package details

AuthorMorgane Pierre-Jean [aut, cre], Pierre Neuvial [aut], Guillem Rigaill [aut]
MaintainerMorgane Pierre-Jean <>
LicenseLGPL (>= 2.1)
Package repositoryView on CRAN
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jointseg documentation built on May 2, 2019, 6:10 a.m.