yuleSim: yuleSim
In laser: Likelihood Analysis of Speciation/Extinction Rates from Phylogenies
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Simulate Branching Times Under the Pure Birth Model
Usage
1
yuleSim(ntaxa, nsets, lambda = 0.01)
Arguments
ntaxa
number of taxa in each set of branching times
nsets
number of datasets of size ntaxa to be simulated
lambda
speciation rate (default = 0.01)
Value
an n x m matrix of branching times, where n is size ntaxa
and m is size nsets
Author(s)
Dan Rabosky drabosky@umich.edu
Examples
1
testdata <- yuleSim(25, 50, lambda = .001)
Example output
Loading required package: ape
Loading required package: geiger
laser documentation built on Jan. 15, 2017, 4:49 p.m.
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Description Usage Arguments Value Author(s) Examples
Description
Simulate Branching Times Under the Pure Birth Model
Usage
1 | yuleSim(ntaxa, nsets, lambda = 0.01)
|
Arguments
ntaxa |
number of taxa in each set of branching times |
nsets |
number of datasets of size |
lambda |
speciation rate (default = 0.01) |
Value
an n x m matrix of branching times, where n is size ntaxa
and m is size nsets
Author(s)
Dan Rabosky drabosky@umich.edu
Examples
1 | testdata <- yuleSim(25, 50, lambda = .001)
|
Example output
Loading required package: ape
Loading required package: geiger
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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