Man pages for liayson
Linking Singe-Cell Transcriptomes Atween Contemporary Subpopulation Genomes
| aggregateSegmentExpression | Aggregating genes across copy number segments. |
| assignCellsToClusters | Assigns cells to previously defined clones. |
| clusterCells | Grouping cells into clones. |
| cnps | Segment-by-cell matrix of copy number states from NCI-N87... |
| epg | Gene-by-cell matrix of expression from NCI-N87 cell line. |
| eps | Segment-by-cell matrix of expression from NCI-N87 cell line. |
| getNumRes | Clone size resolution. |
| runLIAYSON | Main Function. |
| saveClusteredCells | Saving clones to user-defined output. |
| segmentExpression2CopyNumber | Calling CNVs. |
| segments | Bulk copy number profile of NCI-N87 cell line. |
