segments: Bulk copy number profile of NCI-N87 cell line.
In liayson: Linking Singe-Cell Transcriptomes Atween Contemporary Subpopulation Genomes
segments R Documentation
Bulk copy number profile of NCI-N87 cell line.
Description
Copy number segmentation matrix obtained as average among G0G1 cells.
Usage
data(segments)
Format
Matrix in which each row corresponds to a copy number segment as calculated by a circular binary segmentation algorithm. Has to contain at least the following column names:
chr - chromosome;
startpos - the first genomic position of a copy number segment;
endpos - the last genomic position of a copy number segment;
CN_Estimate - the copy number estimated for each segment.
Source
Data obtained from Ji lab at Stanford.
liayson documentation built on Sept. 30, 2022, 1:07 a.m.
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| segments | R Documentation |
Bulk copy number profile of NCI-N87 cell line.
Description
Copy number segmentation matrix obtained as average among G0G1 cells.
Usage
data(segments)
Format
Matrix in which each row corresponds to a copy number segment as calculated by a circular binary segmentation algorithm. Has to contain at least the following column names:
chr - chromosome;
startpos - the first genomic position of a copy number segment;
endpos - the last genomic position of a copy number segment;
CN_Estimate - the copy number estimated for each segment.
Source
Data obtained from Ji lab at Stanford.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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