L_2way_Factorial_ANOVA: Likelihood Supports for Two-way Independent Samples Factorial...

In likelihoodR: Likelihood Analyses for Common Statistical Tests

Likelihood Supports for Two-way Independent Samples Factorial ANOVA

Description

This function calculates supports for independent samples ANOVA. One support is for the full model versus null (no factors), and the second is for full model versus main effects. Two contrasts can be specified which can be used to explore interactions. Each should be given as a vector arranged as means for factor1 changing first (see example). If only the first contrast is specified then this is compared to the main effects model. If a second contrast is specified then the first contrast is compared to it. Corrected support is given where appropriate, using Akaike's correction (Hurvich & Tsai (1989)). No correction is necessary for the two contrasts support since they both involve 1 parameter. Unequal group sizes are accommodated, using type III sums of squares. F, p and partial eta-squared values are given for the two factors and their interaction.

Usage

L_2way_Factorial_ANOVA(data, factor1, factor2, contrast1=NULL, contrast2=NULL, verb=TRUE)

Arguments

data	a (non-empty) numeric vector of data values.
factor1	a vector the same length as data, coding the first factor.
factor2	a vector the same length as data, coding the second factor.
contrast1	first contrast, with values for factor1 changing first, default = NULL.
contrast2	second contrast, default = NULL.
verb	show output, default = TRUE.

Value

$S.12c - corrected support for full model versus null.

$S.12 - uncorrected support for full model versus null.

$S_FMc - corrected support for full model versus main effects model.

$S.FM - uncorrected support for full versus main effects.

$S.c1.Mc - corrected support for first contrast versus main effects model.

$S.c1.M - uncorrected support for first contrast versus main effects.

$S.c1.c2 - support for first versus second contrast.

$Means - 2 way table of means.

$df - degrees of freedom for the ANOVA.

$F.f1 - F value for first factor main effect.

$Pval.f1 - P value for first factor main effect.

$eta.sq.1 - partial eta-squared for first factor main effect.

$F.f2 - F value for second factor main effect.

$Pval.f2 - P value for second factor main effect.

$eta.sq.2 - partial eta-squared for second factor main effect.

$F.int - F value for interaction.

$Pval.int - P value for interaction.

$eta.sq.12 - partial eta-squared for the interaction.

$F.val.c1 - F value for first contrast.

$P.val.c1 - P value for first contrast.

References

Cahusac, P.M.B. (2020) Evidence-Based Statistics, Wiley, ISBN : 978-1119549802

Hurvich CM, Tsai C-L. Regression and time series model selection in small samples. Biometrika. 1989; 76(2):297.

Dixon P. The effective number of parameters in post hoc models. Behavior Research Methods. 2013; 45(3):604.

Dixon P. The p-value fallacy and how to avoid it. Canadian Journal of Experimental Psychology/Revue canadienne de psychologie expérimentale. 2003; 57(3):189.

Glover S, Dixon P. Likelihood ratios: a simple and flexible statistic for empirical psychologists. Psychonomic Bulletin and Review. 2004; 11(5):791.

Examples

# blood clotting times example, p 91
time <- c(6.4,	4.6,	6.4,	5.6,	5.9, 6.1,	6.3,	4.5,
4.8,	6.6, 7,	9.3,	7.9,	9.4,	8.2, 4.4,	4.2,	5,
6.9,	4.5, 4,	4.3,	6.9,	5.5,	5.8,
4.4,	4.2,	5.1,	6.9,	4.5)
Treatment = gl(3,5,30, labels=c("T1","T2","T3"))
Health = gl(2,15,30, labels=c("Hemophiliac","Normal"))

L_2way_Factorial_ANOVA(time, Treatment, Health)

contrast1 <- c(-1, -1, 5,
               -1, -1, -1) # interaction Hemo T3 higher than others
L_2way_Factorial_ANOVA(time, Treatment, Health, contrast1)

contrast2 <- c(-1, -1, -1,
               1, 1, 1) # main effect of health status (Hemo higher than Normal)

m=L_2way_Factorial_ANOVA(time, Treatment, Health, contrast1, contrast2)
m     #show outputs

likelihoodR documentation built on Sept. 14, 2023, 9:08 a.m.