coef.lfq_fit: Extract coefficients from a lineage frequency model

In lineagefreq: Lineage Frequency Dynamics from Genomic Surveillance Counts

Extract coefficients from a lineage frequency model

Description

Extract coefficients from a lineage frequency model

Usage

## S3 method for class 'lfq_fit'
coef(object, type = c("growth_rate", "all"), ...)

Arguments

object	An lfq_fit object.
type	What to return: "growth_rate" (default) for growth rates only, or "all" for intercepts and growth rates.
...	Ignored.

Value

Named numeric vector.

Examples

sim <- simulate_dynamics(n_lineages = 3,
  advantages = c("A" = 1.2, "B" = 0.8), seed = 1)
fit <- fit_model(sim)
coef(fit)

lineagefreq documentation built on April 3, 2026, 9:09 a.m.