| CP_se | Compute a conditional probability of observing a set of... |
| fitParaAR1 | Performs the maximum likelihood estimation for the negative... |
| fitParaIND | Performs the maximum likelihood estimation for the negative... |
| fitSemiAR1 | Fit the semi-parametric negative binomial mixed-effect AR(1)... |
| fitSemiIND | Fit the semi-parametric negative binomial mixed-effect... |
| index_batch | The main function to compute the point estimates and 95%... |
| jCP_ar1 | Compute a conditional probability of observing a set of... |
| lmeNB | Performs the maximum likelihood estimation for the negative... |
| lmeNB-internal | Internal lmeNB functions |
| RElmeNB | Calculate predicted values of E(Gi|Yi) given the estimates of... |
| rNBME_R | Simulate a dataset from the negative binomial mixed-effect... |
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