getCI: Confidence Interval After Trial Termination

In lrstat: Power and Sample Size Calculation for Non-Proportional Hazards and Beyond

Confidence Interval After Trial Termination

Description

Obtains the p-value, median unbiased point estimate, and confidence interval after the end of a group sequential trial.

Usage

getCI(
  L = NA_integer_,
  zL = NA_real_,
  IMax = NA_real_,
  informationRates = NA_real_,
  efficacyStopping = NA_integer_,
  criticalValues = NA_real_,
  alpha = 0.025,
  typeAlphaSpending = "sfOF",
  parameterAlphaSpending = NA_real_,
  spendingTime = NA_real_
)

Arguments

L	The termination look.
zL	The z-test statistic at the termination look.
IMax	The maximum information of the trial.
informationRates	The information rates up to look L.
efficacyStopping	Indicators of whether efficacy stopping is allowed at each stage up to look L. Defaults to true if left unspecified.
criticalValues	The upper boundaries on the z-test statistic scale for efficacy stopping up to look L.
alpha	The significance level. Defaults to 0.025.
typeAlphaSpending	The type of alpha spending. One of the following: "OF" for O'Brien-Fleming boundaries, "P" for Pocock boundaries, "WT" for Wang & Tsiatis boundaries, "sfOF" for O'Brien-Fleming type spending function, "sfP" for Pocock type spending function, "sfKD" for Kim & DeMets spending function, "sfHSD" for Hwang, Shi & DeCani spending function, and "none" for no early efficacy stopping. Defaults to "sfOF".
parameterAlphaSpending	The parameter value of alpha spending. Corresponds to Delta for "WT", rho for "sfKD", and gamma for "sfHSD".
spendingTime	The error spending time up to look L. Defaults to missing, in which case, it is the same as informationRates.

Value

A data frame with the following components:

• pvalue: p-value for rejecting the null hypothesis.

• thetahat: Median unbiased point estimate of the parameter.

• cilevel: Confidence interval level.

• lower: Lower bound of confidence interval.

• upper: Upper bound of confidence interval.

Author(s)

Kaifeng Lu, [e-mail]

References

Anastasios A. Tsiatis, Gary L. Rosner and Cyrus R. Mehta. Exact confidence intervals following a group sequential test. Biometrics 1984;40:797-803.

Examples

# group sequential design with 90% power to detect delta = 6
delta = 6
sigma = 17
n = 282
(des1 = getDesign(IMax = n/(4*sigma^2), theta = delta, kMax = 3,
                  alpha = 0.05, typeAlphaSpending = "sfHSD",
                  parameterAlphaSpending = -4))

# crossed the boundary at the second look
L = 2
n1 = n*2/3
delta1 = 7
sigma1 = 20
zL = delta1/sqrt(4/n1*sigma1^2)

# confidence interval
getCI(L = L, zL = zL, IMax = n/(4*sigma1^2),
      informationRates = c(1/3, 2/3), alpha = 0.05,
      typeAlphaSpending = "sfHSD", parameterAlphaSpending = -4)

lrstat documentation built on Oct. 18, 2024, 9:06 a.m.