Files in markovchain

Easy Handling Discrete Time Markov Chains

NEWS.md README.md R/RcppExports.R R/markovchain.R R/aggregateStates.R R/closestReversible.R R/supplementaryPlot.R R/sensitivity.R R/selectOrder.R R/kemeny.R R/ctmcProbabilistic.R R/fitHigherOrder.R R/random.R R/serialization.R R/mixingDiagnostics.R R/fundamentalMatrix.R R/data.R R/matlab_package_functions.R R/probabilistic.R R/ctmcClassesAndMethods.R R/graphExport.R R/hommc.R R/entropyRate.R R/fitMTD.R R/generators.R R/spectralDiagnostics.R R/statisticalTests.R R/independenceTest.R R/zzz.R R/chainTransforms.R R/markovchainFitAbsorbing.R R/classesAndMethods.R R/dynamics.R R/autoplot.R R/higherOrderPredict.R R/zzz_reachability.R R/utils.R R/fittingFunctions.R inst/doc/gsoc_2017_additions.R inst/doc/an_introduction_to_markovchain_package.pdf inst/doc/an_introduction_to_markovchain_package.R inst/doc/higher_order_markov_chains.R inst/doc/an_introduction_to_markovchain_package.Rmd inst/extdata/README_berchtold_raftery.md demo/reliability.R demo/bard.R demo/extractMatrices.R demo/mathematica.R demo/examples.R demo/quasiBayesian.R demo/computationTime.R demo/quickStart.R tests/testthat.R tests/testthat/testHittingSolvers.R tests/testthat/testStochasticMonotonicity.R tests/testthat/testBasic1.R tests/testthat/test-assessIndependence.R tests/testthat/test-chainTransforms.R tests/testthat/test-ctmc-expectedtime-small.R tests/testthat/testHittingProbabilities.R tests/testthat/test-fitHigherOrder.R tests/testthat/test-kullback-empirical-theoretical.R tests/testthat/test-assessStationarity-structural-zeros.R tests/testthat/testParallelRNG.R tests/testthat/testMemorySafety.R tests/testthat/test-berchtold-raftery-2002.R tests/testthat/testByrowStructuralAnalysis.R tests/testthat/test-timeCorrelations.R tests/testthat/test-random-generators.R tests/testthat/test-fit-list-methods.R tests/testthat/testFits.R tests/testthat/tests_rcpp_optimizations.R tests/testthat/testPredictKnownState.R tests/testthat/test-fitMTD.R tests/testthat/test-entropyRate.R tests/testthat/test-predictHommc.R tests/testthat/testStructuralAnalysisPublicExamples.R tests/testthat/test-mixingDiagnostics.R tests/testthat/test-fit-byrow-orientation.R tests/testthat/test-ctmcFittingFunctions.R tests/testthat/test-graphExport.R tests/testthat/testStatesClassification.R tests/testthat/test-fitting-uncertainty-regression.R tests/testthat/testPeriod.R tests/testthat/test-markovchainFit-progress.R tests/testthat/testctmc.R tests/testthat/test-sparse.R tests/testthat/test-fundamentalMatrix.R tests/testthat/test-dynamics.R tests/testthat/test-higherOrderLogLik.R tests/testthat/test-serialization.R tests/testthat/test-spectralDiagnostics.R tests/testthat/test-verifyMarkovProperty.R tests/testthat/test-lumpability.R tests/testthat/test-mergeWith.R tests/testthat/test-xml-summary.R tests/testthat/testByrowFalseEquivalence.R tests/testthat/test-sensitivity.R tests/testthat/test-kemeny.R tests/testthat/test-closestReversible.R tests/testthat/test-generators.R tests/testthat/test-statisticalTests-revised.R tests/testthat/test-selectOrder.R tests/testthat/test-aggregateStates.R tests/testthat/test-higherOrderPredict.R tests/testthat/testMultinomCI.R tests/testthat/testNoofVisitsDist.R tests/testthat/test-input-hardening.R tests/testthat/testAbsorbingStates.R tests/testthat/testSanitizeAbsorbing.R tests/testthat/test-autoplot.R vignettes/an_introduction_to_markovchain_package.Rmd man/freq2Generator.Rd man/expectedRewards.Rd man/absorptionProbabilities.Rd man/hommc-class.Rd man/meanAbsorptionTime.Rd man/states.Rd man/generatorToTransitionMatrix.Rd man/higherOrderPredict.Rd man/kullback.Rd man/toDot.Rd man/subchain.Rd man/relaxationTime.Rd man/predictiveDistribution.Rd man/blanden.Rd man/markovchainSequence.Rd man/higherOrderLogLik.Rd man/ones.Rd man/is.TimeReversible.Rd man/inferHyperparam.Rd man/spectralGap.Rd man/probabilityatT.Rd man/identityChain.Rd man/dot-asHtest.Rd man/randomMarkovChain.Rd man/fundamentalMatrix.Rd man/is.accessible.Rd man/markovchain-class.Rd man/fitMTD.Rd man/toNthOrder.Rd man/normalizedEntropyRate.Rd man/aggregateStates.Rd man/structuralAnalysis.Rd man/committorAB.Rd man/rain.Rd man/hittingProbabilities.Rd man/ExpectedTime.Rd man/hommc-show.Rd man/kemenyConstant.Rd man/topologicalEntropy.Rd man/slem.Rd man/markovchainFit.Rd man/is.CTMCirreducible.Rd man/autoplot.markovchain.Rd man/firstPassageMultiple.Rd man/meanRecurrenceTime.Rd man/multinomialConfidenceIntervals.Rd man/dirichletChain.Rd man/birthDeath.Rd man/preproglucacon.Rd man/steadyStates.Rd man/meanFirstPassageTime.Rd man/selectOrder.Rd man/impreciseProbabilityatT.Rd man/meanNumVisits.Rd man/is.regular.Rd man/noofVisitsDist.Rd man/sales.Rd man/urnModel.Rd man/tauchen.Rd man/tm_abs.Rd man/ctmcFit.Rd man/rmarkovchain.Rd man/firstPassage.Rd man/autoLump.Rd man/HigherOrderMarkovChain-class.Rd man/rctmc.Rd man/toBoundedChain.Rd man/ictmc-class.Rd man/is.lumpable.Rd man/holson.Rd man/mixingTime.Rd man/ctmc-class.Rd man/redistribute.Rd man/names.Rd man/fitHighOrderMultivarMC.Rd man/rouwenhorst.Rd man/mergeWith.Rd man/predictHommc.Rd man/closestReversible.Rd man/entropyRate.Rd man/fitHigherOrder.Rd man/priorDistribution.Rd man/populationGeneticsModel.Rd man/lazyChain.Rd man/setName.Rd man/markovchainListFit.Rd man/conditionalDistribution.Rd man/markovchainList-class.Rd man/getName.Rd man/toFile.Rd man/assessIndependence.Rd man/craigsendi.Rd man/is.reversible.Rd man/zeros.Rd man/toDictionary.Rd man/is.irreducible.Rd man/gamblersRuin.Rd man/transitionProbability.Rd man/statisticalTests.Rd man/timeCorrelations.Rd man/transition2Generator.Rd man/lump.Rd man/markovchain-package.Rd man/is.stochasticallyMonotone.Rd man/impliedTimescales.Rd man/expectedRewardsBeforeHittingA.Rd man/sensitivity.Rd