marmap: Import, Plot and Analyze Bathymetric and Topographic Data

Import xyz data from the NOAA (National Oceanic and Atmospheric Administration, <http://www.noaa.gov>), GEBCO (General Bathymetric Chart of the Oceans, <http://www.gebco.net>) and other sources, plot xyz data to prepare publication-ready figures, analyze xyz data to extract transects, get depth / altitude based on geographical coordinates, or calculate z-constrained least-cost paths.

AuthorEric Pante, Benoit Simon-Bouhet, and Jean-Olivier Irisson
Date of publication2017-01-10 15:32:25
MaintainerEric Pante <pante.eric@gmail.com>
LicenseGPL (>= 3)
Version0.9.6
https://github.com/ericpante/marmap

View on CRAN

Man pages

aleutians: Bathymetric data for the Aleutians (Alaska)

antimeridian.box: Adds a box to maps including antimeridian

as.bathy: Convert to bathymetric data in an object of class bathy

as.raster: Convert bathymetric data to a raster layer

as.SpatialGridDataFrame: Convert bathymetric data to a spatial grid

as.xyz: Convert to xyz format

autoplot.bathy: Ploting bathymetric data with ggplot

celt: Bathymetric data for the North Est Atlantic

check.bathy: Sort bathymetric data matrix by increasing latitude and...

col2alpha: Adds alpha transparency to a (vector of) color(s)

collate.bathy: Collates two bathy matrices with data from either sides of...

combine.buffers: Create a new, (non circular) composite buffer from a list of...

create.buffer: Create a buffer of specified radius around one or several...

diag.bathy: Finds matrix diagonal for non-square matrices

dist2isobath: Computes the shortest great circle distance between any point...

etopo: Etopo colours

florida: Bathymetric data around Florida, USA

fortify.bathy: Extract bathymetry data in a data.frame

get.area: Get projected surface area

get.box: Get bathymetric information of a belt transect

get.depth: Get depth data by clicking on a map

getNOAA.bathy: Import bathymetric data from the NOAA server

get.sample: Get sample data by clicking on a map

get.transect: Compute approximate cross section along a depth transect

griddify: Fill a grid with irregularly spaced data

hawaii: Bathymetric data for Hawaii, USA

irregular: Irregularly spaced bathymetric data.

is.bathy: Test whether an object is of class bathy

lc.dist: Computes least cost distances between two or more locations

linesGC: Add Great Circle lines on a map

marmap: Import, plot and analyze bathymetric and topographic data

metallo: Coral sampling information from the North West Atlantic

nw.atlantic: Bathymetric data for the North West Atlantic

nw.atlantic.coast: Coastline data for the North West Atlantic

outline.buffer: Get a composite buffer in a format suitable for plotting its...

palette.bathy: Build a bathymetry- and/or topography-constrained color...

path.profile: Geographic coordinates, kilometric distance and depth along a...

plotArea: Plotting projected surface areas

plot.bathy: Ploting bathymetric data

plot.buffer: Plots a circular buffer and or its outline

plotProfile: Ploting bathymetric data along a transect or path

read.bathy: Read bathymetric data in XYZ format

readGEBCO.bathy: Read bathymetric data from a GEBCO file

scaleBathy: Adds a scale to a map

space.pies: Automatic placement of piecharts on maps

subsetBathy: Creates bathy objects from larger bathy objects

subsetSQL: Creating and querying local SQL database for bathymetric data

summary.bathy: Summary of bathymetric data of class 'bathy'

trans.mat: Transition matrix

Files in this package

marmap
marmap/inst
marmap/inst/CITATION
marmap/inst/doc
marmap/inst/doc/marmap-ImportExport.pdf
marmap/inst/doc/marmap-DataAnalysis.pdf
marmap/inst/doc/marmap-DataAnalysis.pdf.asis
marmap/inst/doc/marmap.pdf.asis
marmap/inst/doc/marmap-ImportExport.pdf.asis
marmap/inst/doc/marmap.pdf
marmap/NAMESPACE
marmap/data
marmap/data/celt.rda
marmap/data/hawaii.rda
marmap/data/hawaii.sites.rda
marmap/data/metallo.rda
marmap/data/nw.atlantic.coast.rda
marmap/data/florida.rda
marmap/data/nw.atlantic.rda
marmap/data/aleutians.rda
marmap/data/irregular.rda
marmap/R
marmap/R/readGEBCO.bathy.R marmap/R/read.bathy.R marmap/R/plotArea.R marmap/R/get.box.R marmap/R/as.xyz.R marmap/R/plot.buffer.R marmap/R/dist2isobath.R marmap/R/palette.etopo.R marmap/R/autoplot.bathy.R marmap/R/check.bathy.R marmap/R/scaleBathy.R marmap/R/get.area.R marmap/R/combine.buffers.R marmap/R/outline.buffer.R marmap/R/trans.mat.R marmap/R/lc.dist.R marmap/R/antimeridian.box.R marmap/R/collate.bathy.R marmap/R/get.transect.R marmap/R/subsetSQL.R marmap/R/as.SpatialGridDataFrame.R marmap/R/linesGC.R marmap/R/plot.bathy.R marmap/R/fortify.bathy.R marmap/R/palette.bathy.R marmap/R/create.buffer.R marmap/R/print.buffer.R marmap/R/summary.bathy.R marmap/R/diag.bathy.R marmap/R/space.pies.R marmap/R/col2alpha.R marmap/R/griddify.R marmap/R/is.bathy.R marmap/R/get.sample.R marmap/R/path.profile.R marmap/R/setSQL.R marmap/R/get.depth.R marmap/R/subsetBathy.R marmap/R/getNOAA.bathy.R marmap/R/as.bathy.R marmap/R/as.raster.R marmap/R/plotProfile.R
marmap/vignettes
marmap/vignettes/marmap-DataAnalysis.pdf.asis
marmap/vignettes/marmap.pdf.asis
marmap/vignettes/marmap-ImportExport.pdf.asis
marmap/MD5
marmap/build
marmap/build/vignette.rds
marmap/DESCRIPTION
marmap/man
marmap/man/collate.bathy.Rd marmap/man/griddify.Rd marmap/man/col2alpha.Rd marmap/man/read.bathy.Rd marmap/man/as.SpatialGridDataFrame.Rd marmap/man/plot.bathy.Rd marmap/man/dist2isobath.Rd marmap/man/plotProfile.Rd marmap/man/plotArea.Rd marmap/man/irregular.Rd marmap/man/fortify.bathy.Rd marmap/man/subsetSQL.Rd marmap/man/antimeridian.box.Rd marmap/man/space.pies.Rd marmap/man/as.raster.Rd marmap/man/get.area.Rd marmap/man/as.bathy.Rd marmap/man/plot.buffer.Rd marmap/man/get.depth.Rd marmap/man/trans.mat.Rd marmap/man/etopo.Rd marmap/man/celt.Rd marmap/man/linesGC.Rd marmap/man/lc.dist.Rd marmap/man/autoplot.bathy.Rd marmap/man/create.buffer.Rd marmap/man/florida.Rd marmap/man/get.sample.Rd marmap/man/combine.buffers.Rd marmap/man/subsetBathy.Rd marmap/man/readGEBCO.bathy.Rd marmap/man/scaleBathy.Rd marmap/man/nw.atlantic.Rd marmap/man/marmap.Rd marmap/man/metallo.Rd marmap/man/as.xyz.Rd marmap/man/get.box.Rd marmap/man/diag.bathy.Rd marmap/man/summary.bathy.Rd marmap/man/is.bathy.Rd marmap/man/palette.bathy.Rd marmap/man/nw.atlantic.coast.Rd marmap/man/check.bathy.Rd marmap/man/getNOAA.bathy.Rd marmap/man/get.transect.Rd marmap/man/aleutians.Rd marmap/man/hawaii.Rd marmap/man/path.profile.Rd marmap/man/outline.buffer.Rd

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