plotDistances.ddsimcares: Show with distance values (score, orthogonal or full) vs...

In mdatools: Multivariate Data Analysis for Chemometrics

Show with distance values (score, orthogonal or full) vs object indices for DD-SIMCA results.

Description

Show with distance values (score, orthogonal or full) vs object indices for DD-SIMCA results.

Usage

## S3 method for class 'ddsimcares'
plotDistances(
  obj,
  ncomp = obj$ncomp.selected,
  limType = "classic",
  distance = "h",
  log = FALSE,
  show.legend = TRUE,
  lim.lty = c(2, 3),
  lim.col = c("darkgray", "darkgray"),
  lim.lwd = c(1, 1),
  ylim = NULL,
  xlim = NULL,
  show.plot = TRUE,
  show.excluded = FALSE,
  ...
)

Arguments

obj	DD-SIMCA results (object of class ddsimcares)
ncomp	number of components to show the plot for.
limType	limit type to show the plot for ('classic' or 'robust')
distance	which distance to show ("h" for score, "q" for orthogonal or "f" for full distance).
log	logical, apply log transformation or not.
show.legend	logica, show or not colorbar legend on the plot.
lim.lty	vector with two values - types of the lines showing critical limits (extreme, outlier).
lim.col	vector with two values - colors of the lines showing critical limits (extreme, outlier).
lim.lwd	vector with two values - thickness of the lines showing critical limits (extreme, outlier).
ylim	limits for y-axis, if NULL will be estimated automatically.
xlim	limits for x-axis, if NULL will be estimated automatically.
show.plot	logical, if FALSE returns only values and does not show the plot.
show.excluded	logical, show or not the excluded rows (objects).
...	other parameters compatible with mdaplot method.

mdatools documentation built on March 6, 2026, 5:08 p.m.