medfate: Mediterranean Forest Simulation

Functions to simulate forest dynamics using cohort-based description of vegetation.

Author
Miquel De Caceres
Date of publication
2016-11-11 00:19:41
Maintainer
Miquel De Caceres <miquelcaceres@gmail.com>
License
GPL (>= 2)
Version
0.2.2

View on CRAN

Man pages

defaultControl
Default control parameters for models
defaultSoilParams
Default soil parameters
exampleforest
Example forest stand
examplemeteo
Example daily meteorology data
exampleSPF
Example of spatial points with forest data
extractSFIforest
Extract forest from SFI data
fire.behaviour
Fire behaviour functions
forest
Forest description
forest2swbInput
Input variables for soil water balance
forestvalues
Forest description functions
fuel.properties
Fuel stratification and fuel characteristics
hydraulics
Hydraulic model functions
plantvalues
Plant description functions
plot.swb
Displays soil water balance results
raininterception
Rainfall interception
root
Distribution of fine roots
SFM_metric
Standard fuel models (Albini 1976, Scott & Burgan 2005)
soil
Soil definition
soiltexture
Soil texture functions
spatialForestSummary
Forest and soil summaries over space
SpatialGridForest-class
Class '"SpatialGridForest"'
SpatialPointsForest
Creates Spatial Forest Classes
SpatialPointsForest-class
Class '"SpatialPointsForest"'
speciesvalues
Species description functions
SpParamsMED
Parameter values for Mediterranean species
swb
Soil water balance model
swbfunctions
Soil infiltration and bare soil evaporation
swbgrid
Soil water balance and lateral water discharge
swbpoints
Soil water balance model for spatially-distributed forest...
VerticalProfiles
Vertical profiles

Files in this package

medfate
medfate/inst
medfate/inst/CITATION
medfate/inst/doc
medfate/inst/doc/Hydraulics.Rnw
medfate/inst/doc/SoilWaterBalance.Rnw
medfate/inst/doc/RootSystems.R
medfate/inst/doc/RootSystems.Rnw
medfate/inst/doc/Hydraulics.R
medfate/inst/doc/SoilWaterBalance.pdf
medfate/inst/doc/FireBehaviour.Rnw
medfate/inst/doc/Hydraulics.pdf
medfate/inst/doc/RootSystems.pdf
medfate/inst/doc/SoilWaterBalance.R
medfate/inst/doc/FireBehaviour.R
medfate/inst/doc/FireBehaviour.pdf
medfate/src
medfate/src/windextinction.cpp
medfate/src/hydraulics.h
medfate/src/forestutils.h
medfate/src/PenmanMonteith.h
medfate/src/hydraulics.cpp
medfate/src/fuelstructure.h
medfate/src/soil.h
medfate/src/fuelstructure.cpp
medfate/src/forestutils.cpp
medfate/src/soil.cpp
medfate/src/firebehaviour.cpp
medfate/src/windextinction.h
medfate/src/fuelmoisture.h
medfate/src/lightextinction.h
medfate/src/fireutils.cpp
medfate/src/swb.h
medfate/src/swb.cpp
medfate/src/PenmanMonteith.cpp
medfate/src/fireutils.h
medfate/src/fuelmoisture.cpp
medfate/src/RcppExports.cpp
medfate/src/lightextinction.cpp
medfate/NAMESPACE
medfate/data
medfate/data/exampleforest.rda
medfate/data/exampleSPF.rda
medfate/data/examplemeteo.rda
medfate/data/SFM_metric.rda
medfate/data/SpParamsMED.rda
medfate/R
medfate/R/swbgrid.R
medfate/R/defaultSoilParams.R
medfate/R/summary.forest.R
medfate/R/VerticalProfiles.R
medfate/R/DefineSpatialClasses.R
medfate/R/summary.swb.R
medfate/R/plot.swbgrid.R
medfate/R/swbpoints.R
medfate/R/RcppExports.R
medfate/R/extractSFIforest.R
medfate/R/swb.functions.R
medfate/R/SpatialPointsForest.R
medfate/R/translateSpeciesCodes.R
medfate/R/SpatialGridForest.R
medfate/R/plot.swb.R
medfate/R/defaultControl.R
medfate/R/print.soil.R
medfate/R/emptyforest.R
medfate/vignettes
medfate/vignettes/Hydraulics.Rnw
medfate/vignettes/SoilWaterBalance.Rnw
medfate/vignettes/Hydraulics-004.pdf
medfate/vignettes/RootSystems.Rnw
medfate/vignettes/FireBehaviour.Rnw
medfate/vignettes/Hydraulics-029.pdf
medfate/vignettes/FireBehaviour-004.pdf
medfate/vignettes/SoilWaterBalance-002.pdf
medfate/MD5
medfate/build
medfate/build/vignette.rds
medfate/DESCRIPTION
medfate/man
medfate/man/plantvalues.Rd
medfate/man/soiltexture.Rd
medfate/man/forest.Rd
medfate/man/SpParamsMED.Rd
medfate/man/swb.Rd
medfate/man/forestvalues.Rd
medfate/man/raininterception.Rd
medfate/man/forest2swbInput.Rd
medfate/man/swbfunctions.Rd
medfate/man/exampleforest.Rd
medfate/man/swbpoints.Rd
medfate/man/plot.swb.Rd
medfate/man/speciesvalues.Rd
medfate/man/SpatialGridForest-class.Rd
medfate/man/fire.behaviour.Rd
medfate/man/root.Rd
medfate/man/hydraulics.Rd
medfate/man/examplemeteo.Rd
medfate/man/SpatialPointsForest.Rd
medfate/man/fuel.properties.Rd
medfate/man/swbgrid.Rd
medfate/man/exampleSPF.Rd
medfate/man/soil.Rd
medfate/man/defaultSoilParams.Rd
medfate/man/spatialForestSummary.Rd
medfate/man/defaultControl.Rd
medfate/man/VerticalProfiles.Rd
medfate/man/SFM_metric.Rd
medfate/man/SpatialPointsForest-class.Rd
medfate/man/extractSFIforest.Rd