row.ttest.statp: Row paired t-tests

In metaMA: Meta-Analysis for MicroArrays

Row paired t-tests

Description

Performs t-tests for paired data row by row.

Usage

row.ttest.statp(mat)

Arguments

mat	Matrix with data to be tested (for example, log-ratios in microarray experiments).

Details

This function is much faster than employing apply with FUN=t.test.

Value

Vector with t-test statistics.

Examples

## The function is currently defined as
function(mat){ 
m<-rowMeans(mat,na.rm=TRUE) 
sd<-rowSds(mat,na.rm=TRUE)  
tstat<-m/(sd*sqrt(1/dim(mat)[2])) 
return(tstat)}

metaMA documentation built on April 12, 2022, 5:07 p.m.