lines.nebpath: Plot lines for Nudged Elastic Band

In metadynminer: Tools to Read, Analyze and Visualize Metadynamics HILLS Files from 'Plumed'

Plot lines for Nudged Elastic Band

Description

'lines.nebpath' plots lines for free energy profile calculated by Nudged Elastic Band.

Usage

## S3 method for class 'nebpath'
lines(x, col = "red", lwd = 1, ...)

Arguments

x	nebpath object.
col	color code or name, see 'par'.
lwd	line width for drawing symbols see 'par'.
...	further arguments passed to or from other methods.

Examples

tfes<-fes(acealanme, imax=5000)
minima<-fesminima(tfes)
nebAD<-neb(minima, min1="A", min2="D", nsteps=20)
plot(nebAD)
lines(nebAD, lwd=4)

metadynminer documentation built on April 14, 2022, 5:06 p.m.