mi: Missing Data Imputation and Model Checking

The mi package provides functions for data manipulation, imputing missing values in an approximate Bayesian framework, diagnostics of the models used to generate the imputations, confidence-building mechanisms to validate some of the assumptions of the imputation algorithm, and functions to analyze multiply imputed data sets with the appropriate degree of sampling uncertainty.

Install the latest version of this package by entering the following in R:
install.packages("mi")
AuthorAndrew Gelman [ctb], Jennifer Hill [ctb], Yu-Sung Su [aut], Masanao Yajima [ctb], Maria Pittau [ctb], Ben Goodrich [cre, aut], Yajuan Si [ctb], Jon Kropko [aut]
Date of publication2015-04-16 19:53:48
MaintainerBen Goodrich <benjamin.goodrich@columbia.edu>
LicenseGPL (>= 2)
Version1.0
http://www.stat.columbia.edu/~gelman/

View on CRAN

Man pages

00mi-package: Iterative Multiple Imputation from Conditional Distributions

01missing_variable: Class "missing_variable" and Inherited Classes

02missing_data.frame: Class "missing_data.frame"

03change: Make Changes to Discretionary Characteristics of Missing...

04mi: Multiple Imputation

05Rhats: Convergence Diagnostics

06pool: Estimate a Model Pooling Over the Imputed Datasets

07complete: Extract the Completed Data

allcategorical_missing_data.frame: Class "allcategorical_missing_data.frame"

bounded: Class "bounded-continuous"

categorical: Class "categorical" and Inherited Classes

censored-continuous: The "censored-continuous" Class, the "truncated-continuous"...

CHAIN: Subset of variables from the CHAIN project

continuous: Class "continuous"

count: Class "count"

experiment_missing_data.frame: Class "experiment_missing_data.frame"

fit_model: Wrappers To Fit a Model

get_parameters: An Extractor Function for Model Parameters

hist: Histograms of Multiply Imputed Data

irrelevant: Class "irrelevant" and Inherited Classes

mi2stata: Exports completed data in Stata (.dta) or comma-separated...

mi-internal: Internal Functions and Methods

mipply: Apply a Function to a Object of Class mi

multilevel_missing_data.frame: Class "multilevel_missing_data.frame"

multinomial: The multinomial family

nlsyV: National Longitudinal Survey of Youth Extract

positive: Class "positive-continuous" and Inherited Classes

rdata.frame: Generate a random data.frame with tunable characteristics

semi-continuous: Class "semi-continuous" and Inherited Classes

Functions

01missing_variable Man page
02missing_data.frame Man page
03change Man page
04mi Man page
05Rhats Man page
06pool Man page
07complete Man page
allcategorical_missing_data.frame Man page
allcategorical_missing_data.frame-class Man page
betareg-class Man page
binary-class Man page
bounded-continuous Man page
bounded-continuous-class Man page
categorical Man page
categorical-class Man page
censored-continuous Man page
censored-continuous-class Man page
CHAIN Man page
change Man page
change_family Man page
change_family,missing_data.frame,character,character-method Man page
change_family,missing_data.frame,character,family-method Man page
change_family,missing_data.frame,character,list-method Man page
change_family,missing_data.frame,logical,character-method Man page
change_family,missing_data.frame,logical,family-method Man page
change_family,missing_data.frame,numeric,character-method Man page
change_family,missing_data.frame,numeric,family-method Man page
change_family,missing_data.frame,numeric,list-method Man page
change_family,missing,missing_variable,family-method Man page
change_family,missing,missing_variable,missing-method Man page
change_family,missing,proportion,family-method Man page
change_family,missing,unordered-categorical,family-method Man page
change_imputation_method Man page
change_imputation_method,missing_data.frame,character,character- Man page
change_imputation_method,missing_data.frame,logical,character-me Man page
change_imputation_method,missing_data.frame,numeric,character-me Man page
change_imputation_method,missing,missing_variable,character-meth Man page
change_imputation_method,missing,missing_variable,missing-method Man page
change_link Man page
change_link,missing_data.frame,character,character-method Man page
change_link,missing_data.frame,logical,character-method Man page
change_link,missing_data.frame,numeric,character-method Man page
change_link,missing,missing_variable,character-method Man page
change_link,missing,missing_variable,missing-method Man page
change,mdf_list,ANY,ANY,ANY-method Man page
change-methods Man page
change,missing_data.frame,ANY,ANY,character-method Man page
change,missing_data.frame,ANY,character,numeric-method Man page
change,missing_data.frame,ANY,logical,character-method Man page
change,missing_data.frame,ANY,logical,numeric-method Man page
change,missing_data.frame,ANY,numeric,numeric-method Man page
change_model Man page
change_model,missing_data.frame,character,character-method Man page
change_model,missing_data.frame,logical,character-method Man page
change_model,missing_data.frame,numeric,character-method Man page
change_model,missing,missing_variable,character-method Man page
change_size Man page
change_size,missing,categorical,integer-method Man page
change_size,missing_data.frame,missing,integer-method Man page
change_size,missing_data.frame,numeric-method Man page
change_size,missing,fixed,integer-method Man page
change_size,missing,missing_variable,integer-method Man page
change_transformation Man page
change_transformation,missing_data.frame,character,character-met Man page
change_transformation,missing_data.frame,character,function-meth Man page
change_transformation,missing_data.frame,character,missing-metho Man page
change_transformation,missing_data.frame,logical,character-metho Man page
change_transformation,missing_data.frame,logical,function-method Man page
change_transformation,missing_data.frame,numeric,character-metho Man page
change_transformation,missing_data.frame,numeric,function-method Man page
change_transformation,missing,missing_variable,function-method Man page
change_transformation,missing,missing_variable,missing-method Man page
change_type Man page
change_type,missing_data.frame,character,character-method Man page
change_type,missing_data.frame,character,missing-method Man page
change_type,missing_data.frame,logical,character-method Man page
change_type,missing_data.frame,numeric,character-method Man page
change_type,missing,missing_variable,character-method Man page
change_type,missing,missing_variable,missing-method Man page
clogit-class Man page
coerce,data.frame,missing_data.frame-method Man page
coerce,matrix,missing_data.frame-method Man page
coerce,missing_data.frame,data.frame-method Man page
coerce,missing_data.frame,matrix-method Man page
complete Man page
complete,binary,integer-method Man page
complete,categorical,integer-method Man page
complete,continuous,integer-method Man page
complete,irrelevant,integer-method Man page
complete-methods Man page
complete,mi,integer-method Man page
complete,mi_list,missing-method Man page
complete,mi_list,numeric-method Man page
complete,mi,missing-method Man page
complete,mi,numeric-method Man page
complete,missing_data.frame,integer-method Man page
complete,missing_data.frame,numeric-method Man page
complete,missing_variable,integer-method Man page
complete,nonnegative-continuous,integer-method Man page
complete,SC_proportion,integer-method Man page
continuous Man page
continuous-class Man page
count-class Man page
display,pooled-method Man page
experiment_missing_data.frame Man page
experiment_missing_data.frame-class Man page
family-class Man page
FF_censored-continuous-class Man page
FF_truncated-continuous-class Man page
fit_model Man page
fit_model,binary,allcategorical_missing_data.frame-method Man page
fit_model,binary,missing_data.frame-method Man page
fit_model,censored-continuous,missing_data.frame-method Man page
fit_model,character,mi-method Man page
fit_model,continuous,experiment_missing_data.frame-method Man page
fit_model,continuous,missing_data.frame-method Man page
fit_model,count,missing_data.frame-method Man page
fit_model,grouped-binary,missing_data.frame-method Man page
fit_model,interval,missing_data.frame-method Man page
fit_model,irrelevant,missing_data.frame-method Man page
fit_model-methods Man page
fit_model,missing,allcategorical_missing_data.frame-method Man page
fit_model,missing_data.frame,missing_data.frame-method Man page
fit_model,missing,mdf_list-method Man page
fit_model,missing,mi-method Man page
fit_model,missing,missing_data.frame-method Man page
fit_model,missing,multilevel_missing_data.frame-method Man page
fit_model,missing_variable,experiment_missing_data.frame-method Man page
fit_model,missing_variable,missing_data.frame-method Man page
fit_model,nonnegative-continuous,missing_data.frame-method Man page
fit_model,ordered-categorical,allcategorical_missing_data.frame- Man page
fit_model,ordered-categorical,missing_data.frame-method Man page
fit_model,proportion,missing_data.frame-method Man page
fit_model,SC_proportion,missing_data.frame-method Man page
fit_model,semi-continuous,missing_data.frame-method Man page
fit_model,truncated-continuous,missing_data.frame-method Man page
fit_model,unordered-categorical,allcategorical_missing_data.fram Man page
fit_model,unordered-categorical,missing_data.frame-method Man page
fixed-class Man page
FN_censored-continuous-class Man page
FN_truncated-continuous-class Man page
get_parameters Man page
get_parameters,ANY-method Man page
get_parameters-methods Man page
get_parameters,mi_list-method Man page
get_parameters,mi-method Man page
get_parameters,missing_data.frame-method Man page
get_parameters,missing_variable-method Man page
get_parameters,multinom-method Man page
get_parameters,polr-method Man page
group-class Man page
grouped-binary-class Man page
hist Man page
hist,binary-method Man page
hist,categorical-method Man page
hist,mdf_list-method Man page
hist-methods Man page
hist,mi_list-method Man page
hist,mi-method Man page
hist,missing_data.frame-method Man page
hist,missing_variable-method Man page
hist,semi-continuous-method Man page
image,dgTMatrix-method Man page
image,mdf_list-method Man page
image,mi_list-method Man page
image,mi-method Man page
image,missing_data.frame-method Man page
initialize,missing_data.frame-method Man page
initialize,missing_variable-method Man page
interval-class Man page
irrelevant Man page
irrelevant-class Man page
MatrixTypeThing-class Man page
mdf_list-class Man page
mi Man page
mi2BUGS Man page
mi2stata Man page
mi,binary,glm-method Man page
mi,bounded-continuous,glm-method Man page
mi,bounded-continuous,missing-method Man page
mi,by,missing-method Man page
mi,categorical,matrix-method Man page
mi,categorical,missing-method Man page
mi,censored-continuous,glm-method Man page
mi,character,missing-method Man page
mi-class Man page
mi,continuous,glm-method Man page
mi,count,glm-method Man page
mi,data.frame,missing-method Man page
mi,grouped-binary,clogit-method Man page
mi-internal Man page
mi,interval,glm-method Man page
mi,irrelevant,ANY-method Man page
mi_list-class Man page
mi,list,missing-method Man page
mi,matrix,missing-method Man page
mi,mdf_list,missing-method Man page
mi-methods Man page
mi,mi_list,missing-method Man page
mi,mi,missing-method Man page
mi,missing_data.frame,mi-method Man page
mi,missing_data.frame,missing-method Man page
mi,missing_variable,ANY-method Man page
mi,missing_variable,missing-method Man page
mi,nonnegative-continuous,glm-method Man page
mi,nonnegative-continuous,missing-method Man page
mi,ordered-categorical,polr-method Man page
mi-package Man page
mipply Man page
mi,proportion,betareg-method Man page
mi,proportion,glm-method Man page
mi,SC_proportion,betareg-method Man page
mi,semi-continuous,glm-method Man page
mi,semi-continuous,missing-method Man page
missing_data.frame Man page
missing_data.frame-class Man page
missing_data.frame,data.frame-method Man page
missing_data.frame,list-method Man page
missing_data.frame,matrix-method Man page
missing_variable Man page
missing_variable,ANY,character-method Man page
missing_variable,ANY,missing-method Man page
missing_variable-class Man page
mi,unordered-categorical,multinom-method Man page
mi,unordered-categorical,RNL-method Man page
multilevel_missing_data.frame Man page
multilevel_missing_data.frame-class Man page
multinom-class Man page
multinomial Man page
NF_censored-continuous-class Man page
NF_truncated-continuous-class Man page
nlsyV Man page
NN_censored-continuous-class Man page
NN_truncated-continuous-class Man page
nonnegative-continuous Man page
nonnegative-continuous-class Man page
ordered-categorical-class Man page
plot,allcategorical_missing_data.frame,binary-method Man page
plot,allcategorical_missing_data.frame,categorical-method Man page
plot,mi,ANY-method Man page
plot,mi_list,ANY-method Man page
plot,mi,missing-method Man page
plot,missing_data.frame,binary-method Man page
plot,missing_data.frame,categorical-method Man page
plot,missing_data.frame,missing-method Man page
plot,missing_data.frame,missing_variable-method Man page
plot,missing_data.frame,semi-continuous-method Man page
pool Man page
pooled-class Man page
pooled-methods Man page
positive-continuous-class Man page
.possible_missing_variable Man page
proportion-class Man page
.prune Man page
rdata.frame Man page
Rhats Man page
RNL-class Man page
SC_proportion Man page
SC_proportion-class Man page
semi-continuous Man page
semi-continuous-class Man page
show,mi-method Man page
show,missing_data.frame-method Man page
show,missing_variable-method Man page
summary,mi-method Man page
summary,missing_data.frame-method Man page
traceplot,mi Man page
traceplot,mi_list Man page
truncated-continuous Man page
truncated-continuous-class Man page
unordered-categorical-class Man page
WeAreFamily-class Man page

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

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