data.toy: Simulated data that include an OTU table, a taxonomy table,...
In miLineage: Association Tests for Microbial Lineages on a Taxonomic Tree
Description
Usage
Format
Source
Examples
Description
This data is simulated based on a mock taxonomic tree. The data contain an OTU table, a taxonomy table, and a covariate. The data include 50 samples (25 case-control pairs) and 7 OTUs.
Usage
1
data("data.toy")
Format
data.toy contains the following objects:
OTU.toy: a matrix of OTU counts for 50 samples and 7 OTUs
Tax.toy: a matrix of taxonomy table with 3 ranks
covariate.toy: a matrix of one variable
Source
This is a simulated data based on a mock taxonomic tree.
Examples
1
miLineage documentation built on May 2, 2019, 10:50 a.m.
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Description Usage Format Source Examples
Description
This data is simulated based on a mock taxonomic tree. The data contain an OTU table, a taxonomy table, and a covariate. The data include 50 samples (25 case-control pairs) and 7 OTUs.
Usage
1 | data("data.toy")
|
Format
data.toy contains the following objects:
OTU.toy: a matrix of OTU counts for 50 samples and 7 OTUs
Tax.toy: a matrix of taxonomy table with 3 ranks
covariate.toy: a matrix of one variable
Source
This is a simulated data based on a mock taxonomic tree.
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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