addPackage: Add packages to a miniCRAN repository.

In miniCRAN: Create a Mini Version of CRAN Containing Only Selected Packages

Add packages to a miniCRAN repository.

Description

Add packages to a miniCRAN repository.

Usage

addPackage(
  pkgs = NULL,
  path = NULL,
  repos = getOption("repos"),
  type = "source",
  Rversion = R.version,
  writePACKAGES = TRUE,
  deps = TRUE,
  quiet = FALSE
)

Arguments

pkgs	Character vector of packages to download
path	Destination download path. This path is the root folder of your new repository.
repos	URL(s) of the 'contrib' sections of the repositories, e.g. "https://cran.us.r-project.org". Passed to available.packages()
type	Possible values are (currently) "source", "mac.binary" and "win.binary": the binary types can be listed and downloaded but not installed on other platforms. Passed to download.packages().
Rversion	Version of R (only used if type is not source.) Defaults to R.version, but this can be specified as any of the following formats: a character string with the two digit R version, e.g. "3.1" a list with components major and minor the result of getRversion() the result of R.version
writePACKAGES	If TRUE, calls write_PACKAGES() to update the repository PACKAGES file.
deps	logical indicating whether the package dependencies should be added (default TRUE).
quiet	If TRUE, suppress status messages (if any), and the progress bar during download.

Value

Installs the packages, rebuilds the package index, and invisibly returns the number of packages written to the index files.

See Also

Other update repo functions: addOldPackage(), checkVersions(), makeRepo(), updatePackages()

Examples

### `checkVersions` and `add.packages.miniCRAN` require an existing miniCRAN repo

# Specify list of packages to download
mirror <- c(CRAN = "https://cloud.r-project.org")
mirror
pkgs <- c("foreach")
pkgTypes <- c("source", "win.binary")

if (interactive()) {
  if (!is.online()) {
    message("p3m seems to be not available.  Check your internet connection.")
  } else {
    pdb <- pkgAvail(repos = mirror, type = "source")
  }
} else {
  pdb <- cranJuly2014
}


if (interactive()) {
  if (!is.online()) {
    message("p3m seems to be not available.  Check your internet connection.")
  } else {
    pkgList <- pkgDep(pkgs, availPkgs = pdb, repos = mirror, type = "source", suggests = FALSE)
    pkgList
  }
}

# Create temporary folder for miniCRAN

if (interactive()) {
  if (!is.online()) {
    message("p3m seems to be not available.  Check your internet connection.")
  } else {
    dir.create(pth <- file.path(tempdir(), "miniCRAN"))
    
    # Make repo for source and win.binary
    makeRepo(pkgList, path = pth, repos = mirror, type = pkgTypes)
    
    # Add other versions of a package (and assume these were added previously)
    oldVers <- data.frame(
      package = c("foreach", "codetools", "iterators"),
      version = c("1.4.0", "0.2-7", "1.0.5"),
      stringsAsFactors = FALSE
    )
    pkgs <- oldVers$package
    addOldPackage(pkgs, path = pth, vers = oldVers$version, repos = mirror, type = "source")
    # NOTE: older binary versions would need to be build from source
    
    # List package versions in the miniCRAN repo (produces warning about duplicates)
    pkgVersionsSrc <- checkVersions(pkgs, path = pth, type = "source")
    pkgVersionsBin <- checkVersions(pkgs, path = pth, type = "win.binary")
    
    # After inspecting package versions, remove old versions
    basename(pkgVersionsSrc$source) # "foreach_1.4.0.tar.gz"  "foreach_1.4.2.tar.gz"
    basename(pkgVersionsBin$win.binary) # "foreach_1.4.0.zip"     "foreach_1.4.2.zip"
    file.remove(c(pkgVersionsSrc$source[1], pkgVersionsBin$win.binary[1]))
    
    # Rebuild package index after adding/removing files
    updateRepoIndex(pth, type = pkgTypes, Rversion = R.version)
    
    pkgAvail(pth, type = "source")
    
    # Add new packages (from CRAN) to the miniCRAN repo
    addPackage("Matrix", path = pth, repos = mirror, type = pkgTypes)
    
    # Delete temporary folder
    unlink(pth, recursive = TRUE)
  }
}

miniCRAN documentation built on May 29, 2024, 7:54 a.m.