| Argentina | R Documentation |
Population allele frequency data for 24 autosomal Short Tandem Repeat (STR) markers from Argentina. These frequencies are used for calculating likelihood ratios in forensic genetics and missing person identification.
data(Argentina)
A data frame with 93 rows (alleles) and 25 columns. First column is Allele (repeat number), remaining columns are allele frequencies for each STR marker.
This dataset contains allele frequencies for the following 24 STR markers: D8S1179, D21S11, D7S820, CSF1PO, D3S1358, THO1, D13S317, D16S539, D2S1338, D19S433, VWA, TPOX, D18S51, D5S818, FGA, PENTAE, PENTAD, D12S391, D1S1656, D6S1043, D10S1248, D22S1045, D2S441, SE33.
The markers are compatible with common forensic STR kits including GlobalFiler, PowerPlex Fusion, and Investigator 24plex.
Allele frequency data compiled from published Argentinian population studies. Format compatible with pedtools and forrel packages.
Marino M, et al. (2009). "Population genetic data for 15 STR loci in the Argentinian population." Forensic Science International: Genetics Supplement Series, 2(1), 369-370. \Sexpr[results=rd]{tools:::Rd_expr_doi("10.1016/j.fsigss.2009.08.178")}
get_allele_freqs for extracting frequencies,
sim_lr_genetic for LR simulations using these frequencies.
Other frequency databases: Europe, Asia,
USA, Austria, BosniaHerz,
China, Japan
# Load the dataset
data(Argentina)
# View structure
head(Argentina)
dim(Argentina)
# List available markers
names(Argentina)[-1]
# Use with pedtools
library(forrel)
freqs <- get_allele_freqs(Argentina)
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