| China | R Documentation |
Comprehensive population allele frequency data for 70 autosomal Short Tandem Repeat (STR) markers from Chinese populations. This is one of the most extensive STR frequency databases available.
data(China)
A data frame with 67 rows (alleles) and 71 columns. First column is Allele (repeat number), remaining columns are allele frequencies for each STR marker.
This comprehensive dataset contains allele frequencies for 70 STR markers, including all standard forensic core loci plus an extensive set of additional markers. This enables very high discrimination power for identification purposes.
Core forensic markers included: CSF1PO, D1S1656, D2S441, D2S1338, D3S1358, D5S818, D7S820, D8S1179, D10S1248, D12S391, D13S317, D16S539, D18S51, D19S433, D21S11, D22S1045, FGA, TH01, TPOX, vWA, SE33.
Extended markers include: PENTA D, PENTA E, D6S1043, D4S2408, D9S1122, and many others for enhanced discrimination.
Chinese population frequency data. Format compatible with pedtools and forrel packages.
Hu S, et al. (2015). "Population genetics of 17 Y-STR loci in the Han ethnic minority from Henan Province, Central China." Forensic Science International: Genetics, 19, e1-e2. \Sexpr[results=rd]{tools:::Rd_expr_doi("10.1016/j.fsigen.2015.05.005")}
get_allele_freqs for extracting frequencies,
sim_lr_genetic for LR simulations.
Other Asian databases: Asia, Japan
# Load the dataset
data(China)
# This is one of the most comprehensive databases
ncol(China) - 1 # 70 markers
# Check common markers with other databases
common <- intersect(names(China), names(Japan))
length(common) # Many shared markers
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