mixedMem: Tools for Discrete Multivariate Mixed Membership Models
Version 1.1.0

Fits mixed membership models with discrete multivariate data (with or without repeated measures) following the general framework of Erosheva et al (2004). This package uses a Variational EM approach by approximating the posterior distribution of latent memberships and selecting hyperparameters through a pseudo-MLE procedure. Currently supported data types are Bernoulli, multinomial and rank (Plackett-Luce). The extended GoM model with fixed stayers from Erosheva et al (2007) is now also supported. See Airoldi et al (2014) for other examples of mixed membership models.

AuthorY. Samuel Wang [aut, cre], Elena A. Erosheva [aut]
Date of publication2015-08-17 01:15:25
MaintainerY. Samuel Wang <ysamwang@uw.edu>
LicenseGPL (>= 2)
Version1.1.0
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("mixedMem")

Getting started

Package overview

Popular man pages

computeELBO: Compute a lower bound on the log-likelihood (ELBO)
findLabels: Mixed Membership Post-Processing
gmv_theta: Point estimates from Gross and Manrique-Vallier 2014
permuteLabels: Mixed Membership Post-Processing
rmixedMem: Simulate Mixed Membership Data
vizMem: Mixed Membership Visualization
vizTheta: Mixed Membership Visualization
See all...

All man pages Function index File listing

Man pages

ANES: Responses from 1983 American National Election Survey Pilot
computeBIC: Compute the approximate BIC
computeELBO: Compute a lower bound on the log-likelihood (ELBO)
findLabels: Mixed Membership Post-Processing
gmv_theta: Point estimates from Gross and Manrique-Vallier 2014
mixedMemModel: Constructor for a Mixed Membership Model Object
mixedMem-package: Tools for fitting discrete multivariate mixed membership...
mmVarFit: Fit Mixed Membership models using variational EM
permuteLabels: Mixed Membership Post-Processing
plot.mixedMemModel: Plot a Mixed Membership Model
rmixedMem: Simulate Mixed Membership Data
summary.mixedMemModel: Summary of a Mixed Membership Model
vizMem: Mixed Membership Visualization
vizTheta: Mixed Membership Visualization

Functions

ANES Man page
checkModel Source code
computeBIC Man page Source code
computeELBO Man page Source code
computeElboC Source code
computeElboExtC Source code
findLabels Man page Source code
gmv_theta Man page
mixedMem Man page
mixedMem-package Man page
mixedMemModel Man page Source code
mmVarFit Man page Source code
permuteLabels Man page Source code
plot.mixedMemModel Man page Source code
rmixedMem Man page Source code
summary.mixedMemModel Man page Source code
varInfInputC Source code
varInfInputExtC Source code
vizMem Man page Source code
vizTheta Man page Source code

Files

inst
inst/doc
inst/doc/mixedMem.Rnw
inst/doc/mixedMem.pdf
inst/doc/mixedMem.R
src
src/Makevars
src/varInf.h
src/eStepExt.cpp
src/mm_model.cpp
src/mm_modelExt.h
src/mStep.cpp
src/extended.cpp
src/mStep.h
src/extended.h
src/mm_model.h
src/eStepExt.h
src/utils.h
src/mStepExt.cpp
src/utils.cpp
src/eStep.cpp
src/mStepExt.h
src/mm_modelExt.cpp
src/varInfExt.cpp
src/varInfExt.h
src/settings.h
src/rFunc.cpp
src/Makevars.win
src/RcppExports.cpp
src/varInf.cpp
src/eStep.h
NAMESPACE
data
data/gmv_theta.rda
data/ANES.rda
R
R/bic_calculator.R
R/findLabels.R
R/check_model.r
R/viz_functions.R
R/mixedMemModel.R
R/RcppExports.R
R/rmixedMem.R
R/ANES.R
R/mmVarFit.R
vignettes
vignettes/mixedMem.Rnw
vignettes/mixedMem-concordance.tex
vignettes/figure
vignettes/figure/polarizing-1.pdf
vignettes/figure/libprop-1.pdf
vignettes/figure/theta-1.pdf
vignettes/figure/consprop-1.pdf
vignettes/figure/posteriorMem-1.pdf
vignettes/figure/mems-1.pdf
vignettes/pl.bib
vignettes/framed.sty
MD5
build
build/vignette.rds
DESCRIPTION
man
man/ANES.Rd
man/vizMem.Rd
man/mmVarFit.Rd
man/gmv_theta.Rd
man/plot.mixedMemModel.Rd
man/vizTheta.Rd
man/permuteLabels.Rd
man/rmixedMem.Rd
man/mixedMem-package.Rd
man/computeBIC.Rd
man/computeELBO.Rd
man/findLabels.Rd
man/summary.mixedMemModel.Rd
man/mixedMemModel.Rd
mixedMem documentation built on May 19, 2017, 2:05 p.m.

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