mlr_measures_classif.mcc: Matthews Correlation Coefficient

In mlr3: Machine Learning in R - Next Generation

Matthews Correlation Coefficient

Description

Measure to compare true observed labels with predicted labels in binary classification tasks.

Details

The Matthews Correlation Coefficient is defined as

\frac{\mathrm{TP} \cdot \mathrm{TN} - \mathrm{FP} \cdot \mathrm{FN}}{\sqrt{(\mathrm{TP} + \mathrm{FP}) (\mathrm{TP} + \mathrm{FN}) (\mathrm{TN} + \mathrm{FP}) (\mathrm{TN} + \mathrm{FN})}}.

This above formula is undefined if any of the four sums in the denominator is 0. The denominator is then set to 1.

Dictionary

This Measure can be instantiated via the dictionary mlr_measures or with the associated sugar function msr():

mlr_measures$get("classif.mcc")
msr("classif.mcc")

Parameters

Empty ParamSet

Meta Information

• Type: "binary"

• Range: [-1, 1]

• Minimize: FALSE

• Required prediction: response

Note

The score function calls mlr3measures::mcc() from package mlr3measures.

If the measure is undefined for the input, NaN is returned. This can be customized by setting the field na_value.

See Also

Dictionary of Measures: mlr_measures

as.data.table(mlr_measures) for a complete table of all (also dynamically created) Measure implementations.

Other classification measures: mlr_measures_classif.acc, mlr_measures_classif.auc, mlr_measures_classif.bacc, mlr_measures_classif.bbrier, mlr_measures_classif.ce, mlr_measures_classif.costs, mlr_measures_classif.dor, mlr_measures_classif.fbeta, mlr_measures_classif.fdr, mlr_measures_classif.fnr, mlr_measures_classif.fn, mlr_measures_classif.fomr, mlr_measures_classif.fpr, mlr_measures_classif.fp, mlr_measures_classif.logloss, mlr_measures_classif.mauc_au1p, mlr_measures_classif.mauc_au1u, mlr_measures_classif.mauc_aunp, mlr_measures_classif.mauc_aunu, mlr_measures_classif.mbrier, mlr_measures_classif.npv, mlr_measures_classif.ppv, mlr_measures_classif.prauc, mlr_measures_classif.precision, mlr_measures_classif.recall, mlr_measures_classif.sensitivity, mlr_measures_classif.specificity, mlr_measures_classif.tnr, mlr_measures_classif.tn, mlr_measures_classif.tpr, mlr_measures_classif.tp

Other binary classification measures: mlr_measures_classif.auc, mlr_measures_classif.bbrier, mlr_measures_classif.dor, mlr_measures_classif.fbeta, mlr_measures_classif.fdr, mlr_measures_classif.fnr, mlr_measures_classif.fn, mlr_measures_classif.fomr, mlr_measures_classif.fpr, mlr_measures_classif.fp, mlr_measures_classif.npv, mlr_measures_classif.ppv, mlr_measures_classif.prauc, mlr_measures_classif.precision, mlr_measures_classif.recall, mlr_measures_classif.sensitivity, mlr_measures_classif.specificity, mlr_measures_classif.tnr, mlr_measures_classif.tn, mlr_measures_classif.tpr, mlr_measures_classif.tp

mlr3 documentation built on Nov. 17, 2023, 5:07 p.m.