mlr_measures_surv.oquigley_r2: O'Quigley, Xu, and Stare's R2 Survival Measure

In mlr3proba: Probabilistic Supervised Learning for 'mlr3'

O'Quigley, Xu, and Stare's R2 Survival Measure

Description

Calls survAUC::OXS().

Assumes Cox PH model specification.

Details

All measures implemented from survAUC should be used with care, we are aware of problems in implementation that sometimes cause fatal errors in R. In future updates these measures will all be re-written and implemented directly in mlr3proba.

Dictionary

This Measure can be instantiated via the dictionary mlr_measures or with the associated sugar function msr():

MeasureSurvOQuigleyR2$new()
mlr_measures$get("surv.oquigley_r2")
msr("surv.oquigley_r2")

Meta Information

• Type: "surv"

• Range: [0, 1]

• Minimize: FALSE

• Required prediction: lp

Super classes

mlr3::Measure -> mlr3proba::MeasureSurv -> MeasureSurvOQuigleyR2

Methods

Public methods

• MeasureSurvOQuigleyR2$new()

• MeasureSurvOQuigleyR2$clone()

Inherited methods

• mlr3::Measure$aggregate()

• mlr3::Measure$format()

• mlr3::Measure$help()

• mlr3::Measure$score()

• mlr3proba::MeasureSurv$print()

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Method new()

Creates a new instance of this R6 class.

Usage

MeasureSurvOQuigleyR2$new()

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Method clone()

The objects of this class are cloneable with this method.

Usage

MeasureSurvOQuigleyR2$clone(deep = FALSE)

Arguments

deep

Whether to make a deep clone.

References

O'Quigley J, Xu R, Stare J (2005). “Explained randomness in proportional hazards models.” Statistics in Medicine, 24(3), 479–489. doi: 10.1002/sim.1946.

See Also

Other survival measures: mlr_measures_surv.calib_alpha, mlr_measures_surv.calib_beta, mlr_measures_surv.chambless_auc, mlr_measures_surv.cindex, mlr_measures_surv.dcalib, mlr_measures_surv.graf, mlr_measures_surv.hung_auc, mlr_measures_surv.intlogloss, mlr_measures_surv.logloss, mlr_measures_surv.mae, mlr_measures_surv.mse, mlr_measures_surv.nagelk_r2, mlr_measures_surv.rcll, mlr_measures_surv.rmse, mlr_measures_surv.schmid, mlr_measures_surv.song_auc, mlr_measures_surv.song_tnr, mlr_measures_surv.song_tpr, mlr_measures_surv.uno_auc, mlr_measures_surv.uno_tnr, mlr_measures_surv.uno_tpr, mlr_measures_surv.xu_r2

Other R2 survival measures: mlr_measures_surv.nagelk_r2, mlr_measures_surv.xu_r2

Other lp survival measures: mlr_measures_surv.calib_beta, mlr_measures_surv.chambless_auc, mlr_measures_surv.hung_auc, mlr_measures_surv.nagelk_r2, mlr_measures_surv.song_auc, mlr_measures_surv.song_tnr, mlr_measures_surv.song_tpr, mlr_measures_surv.uno_auc, mlr_measures_surv.uno_tnr, mlr_measures_surv.uno_tpr, mlr_measures_surv.xu_r2

mlr3proba documentation built on April 25, 2022, 5:07 p.m.