plot.reproData: Plotting method for 'reproData' objects

In morse: Modelling Reproduction and Survival Data in Ecotoxicology

Plotting method for reproData objects

Description

This is the generic plot S3 method for the reproData class. It plots the cumulated number of offspring as a function of time.

Usage

## S3 method for class 'reproData'
plot(
  x,
  xlab,
  ylab = "Cumulated Number of offspring",
  main = NULL,
  concentration = NULL,
  style = "ggplot",
  pool.replicate = FALSE,
  addlegend = FALSE,
  remove.someLabels = FALSE,
  ...
)

Arguments

x	an object of class reproData
xlab	label of the X-axis
ylab	label of the Y-axis, by default Cumulated Number of offspring
main	main title for the plot
concentration	a numeric value corresponding to some concentration in data. If concentration = NULL, draws a plot for each concentration
style	graphical backend, can be 'ggplot' or 'generic'
pool.replicate	if TRUE, the datapoints of each replicate are summed for a same concentration
addlegend	if TRUE, adds a default legend to the plot
remove.someLabels	if TRUE, removes 3/4 of X-axis labels in 'ggplot' style to avoid the label overlap
...	Further arguments to be passed to generic methods

Value

a plot of class ggplot

Note

When style = "generic", the function calls the generic function plot

When style = "ggplot", the function return an object of class gg and ggplot, see function ggplot

Examples

# (1) Load the data
data(cadmium1)

# (2) Create an object of class 'reproData'
cadmium1 <- reproData(cadmium1)

# (3) Plot the reproduction data
plot(cadmium1)

# (4) Plot the reproduction data for a fixed concentration
plot(cadmium1, concentration = 4.36, style = "generic")

morse documentation built on Oct. 29, 2022, 1:14 a.m.