aneur | Aortic aneurysm progression data |
boot.msm | Bootstrap resampling for multi-state models |
bos | Bronchiolitis obliterans syndrome after lung transplants |
cav | Heart transplant monitoring data |
cmodel.object | Developer documentation: censoring model object |
coef.msm | Extract model coefficients |
crudeinits.msm | Calculate crude initial values for transition intensities |
deltamethod | The delta method |
draic.msm | Criteria for comparing two multi-state models with nested... |
ecmodel.object | Developer documentation: model for covariates on... |
efpt.msm | Expected first passage time |
ematrix.msm | Misclassification probability matrix |
emodel.object | Developer documentation: misclassification model structure... |
fev | FEV1 measurements from lung transplant recipients |
hazard.msm | Calculate tables of hazard ratios for covariates on... |
hmm-dists | Hidden Markov model constructors |
hmmMV | Multivariate hidden Markov models |
hmodel2list | Convert a hmodel object to HMM constructor function calls |
hmodel.object | Developer documentation: hidden Markov model structure object |
logLik.msm | Extract model log-likelihood |
lrtest.msm | Likelihood ratio test |
MatrixExp | Matrix exponential |
medists | Measurement error distributions |
model.frame.msm | Extract original data from 'msm' objects. |
msm | Multi-state Markov and hidden Markov models in continuous... |
msm2Surv | Convert data for 'msm' to data for 'survival', 'mstate' or... |
msm.form.qoutput | Extract msm model parameter estimates in compact format |
msm.object | Fitted msm model objects |
msm-package | Multi-State Markov and Hidden Markov Models in Continuous... |
odds.msm | Calculate tables of odds ratios for covariates on... |
paramdata.object | Developer documentation: internal msm parameters object |
pearson.msm | Pearson-type goodness-of-fit test |
pexp | Exponential distribution with piecewise-constant rate |
phasemeans.msm | Parameters of phase-type models in mixture form |
plot.msm | Plots of multi-state models |
plot.prevalence.msm | Plot of observed and expected prevalences |
plotprog.msm | Kaplan Meier estimates of incidence |
plot.survfit.msm | Plot empirical and fitted survival curves |
pmatrix.msm | Transition probability matrix |
pmatrix.piecewise.msm | Transition probability matrix for processes with... |
pnext.msm | Probability of each state being next |
ppass.msm | Passage probabilities |
prevalence.msm | Tables of observed and expected prevalences |
print.msm | Print a fitted msm model object |
printold.msm | Print a fitted msm model object |
psor | Psoriatic arthritis data |
qcmodel.object | Developer documentation: model for covariates on transition... |
qgeneric | Generic function to find quantiles of a distribution |
qmatrix.msm | Transition intensity matrix |
qmodel.object | Developer documentation: transition model structure object |
qratio.msm | Estimated ratio of transition intensities |
recreate.olddata | Convert data stored in msm object to old format |
scoreresid.msm | Score residuals |
simfitted.msm | Simulate from a Markov model fitted using msm |
sim.msm | Simulate one individual trajectory from a continuous-time... |
simmulti.msm | Simulate multiple trajectories from a multi-state Markov... |
sojourn.msm | Mean sojourn times from a multi-state model |
statetable.msm | Table of transitions |
summary.msm | Summarise a fitted multi-state model |
surface.msm | Explore the likelihood surface |
tidy.msm | Tidy the parameter estimates from an msm model |
tidy.msm.est | Tidy the output of pmatrix.msm and similar functions |
tidy.msm.estbystate | Tidy the output of totlos.msm and similar functions |
tidy.msm.prevalence | Tidy the output of prevalence.msm |
tnorm | Truncated Normal distribution |
totlos.msm | Total length of stay, or expected number of visits |
transient.msm | Transient and absorbing states |
twophase | Coxian phase-type distribution with two phases |
updatepars.msm | Update the maximum likelihood estimates in a fitted model... |
viterbi.msm | Calculate the probabilities of underlying states and the most... |
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