Man pages for mstate
Data Preparation, Estimation and Prediction in Multi-State Models
| aidssi | Data from the Amsterdam Cohort Studies on HIV infection and... |
| bmt | BMT data from Klein and Moeschberger |
| crprep.default | Function to create weighted data set for competing risks... |
| Cuminc | Calculate nonparametric cumulative incidence functions and... |
| cutLMms | Cut a multi-state data set at a landmark time point |
| EBMT-cause-of-death-data | Data from the European Society for Blood and Marrow... |
| EBMT-data | Data from the European Society for Blood and Marrow... |
| EBMT-platelet-recovery-data | Data from the European Society for Blood and Marrow... |
| EBMT-year-of-relapse-data | Data from the European Society for Blood and Marrow... |
| ELOS | Expected length of stay |
| etm2msdata | Converts between etm and msdata format |
| events | Count number of observed transitions |
| expand.covs | Expand covariates in competing risks dataset in stacked... |
| expand.covs.msdata | Expand covariates in multi-state dataset in long format |
| haz_function | Helper function that calculates excess and population hazards... |
| Liver-cirrhosis-data | Abnormal prothrombin levels in liver cirrhosis |
| LMAJ | Landmark Aalen-Johansen method |
| MarkovTest | Log-rank based test for the validity of the Markov assumption |
| modify_transMat | Upgrade the transMat object for the multi-state/relsurv... |
| msboot | Bootstrap function in multi-state models |
| msboot.relsurv | Bootstrap function for upgraded multi-state models using... |
| msboot.relsurv.boot | Default theta function used for msboot.relsurv |
| msdata2etm | msdata to etm format |
| msfit | Compute subject-specific transition hazards with... |
| msfit.relsurv | Extend a multi-state model using relative survival |
| msprep | Function to prepare dataset for multi-state modeling in long... |
| mssample | Sample paths through a multi-state model |
| mstate-package | Data preparation, estimation and prediction in multi-state... |
| paths | Find all possible trajectories through a given multi-state... |
| plot.Cuminc | Plot method for Cuminc objects |
| plot.MarkovTest | Plot method for a MarkovTest object |
| plot.msfit | Plot method for an msfit object |
| plot.probtrans | Plot method for a probtrans object |
| print.MarkovTest | Print method for a MarkovTest object |
| print.msdata | Print method for a msdata object |
| print.summary.msfit | Print method for summary.msfit object |
| print.summary.probtrans | Print method for a summary.probtrans object |
| probtrans | Compute subject-specific or overall transition probabilities... |
| redrank | Reduced rank proportional hazards model for competing risks... |
| summary.Cuminc | Summary method for a summary.Cuminc object |
| summary.msfit | Summary method for an msfit object |
| summary.probtrans | Summary method for a probtrans object |
| trans2tra | Convert transition matrix from mstate to etm format |
| transhelp | Help functions for transition matrix |
| transMat | Define transition matrix for multi-state model |
| varHaz.fixed | Upgrade the varHaz object |
| vis.mirror.pt | Mirror plot comparing two probtrans objects |
| vis.multiple.pt | Visualise multiple probtrans objects |
| xsect | Make a cross-section of multi-state data at a given time... |
