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# Multisensi R package ; file plot.gsi.r (last modified: 2016-04-18)
# Authors: C. Bidot, M. Lamboni, H. Monod
# Copyright INRA 2011-2018
# MaIAGE, INRA, Univ. Paris-Saclay, 78350 Jouy-en-Josas, France
#
# More about multisensi in https://CRAN.R-project.org/package=multisensi
#
# This software is governed by the CeCILL license under French law and
# abiding by the rules of distribution of free software. You can use,
# modify and/ or redistribute the software under the terms of the CeCILL
# license as circulated by CEA, CNRS and INRIA at the following URL
# "http://www.cecill.info".
#
# As a counterpart to the access to the source code and rights to copy,
# modify and redistribute granted by the license, users are provided only
# with a limited warranty and the software's author, the holder of the
# economic rights, and the successive licensors have only limited
# liability.
#
# In this respect, the user's attention is drawn to the risks associated
# with loading, using, modifying and/or developing or reproducing the
# software by the user in light of its specific status of free software,
# that may mean that it is complicated to manipulate, and that also
# therefore means that it is reserved for developers and experienced
# professionals having in-depth computer knowledge. Users are therefore
# encouraged to load and test the software's suitability as regards their
# requirements in conditions enabling the security of their systems and/or
# data to be ensured and, more generally, to use and operate it in the
# same conditions as regards security.
#
# The fact that you are presently reading this means that you have had
# knowledge of the CeCILL license and that you accept its terms.
#
#===========================================================================
plot.gsi <- function(x, nb.plot=10, nb.comp=3, graph=1:3, xmax=NULL, beside=TRUE, cor.plot=FALSE, xtick=TRUE, type="l",...)
#===========================================================================
{
## INPUTS
## x: gsi object
nb.comp <- min(ncol(x$H), nb.comp)
nb.plot <- min(nb.plot, nrow(x$tSI))
if(1 %in% graph){
if(dev.cur() == 1 | dev.interactive()) dev.new();
old.par <- par(no.readonly = TRUE)
## Correlation graph and main and total sensitivity indices bars on PCs
graph.pc(x,
nb.plot=nb.plot,
nb.comp=nb.comp,
xmax=xmax,
cor.plot=cor.plot,
xtick=xtick,
beside=beside,
type=type,
...)
par(old.par)
}
if(2 %in% graph & colnames(x$mSI)[ncol(x$mSI)]=="GSI"){
if(dev.cur() == 1 | dev.interactive()) dev.new();
old.par <- par(no.readonly = TRUE)
## Generalised main and total sensitivity indices bars
graph.bar(x,
ncol(x$mSI),
nb.plot,
xmax=xmax,
beside=beside,
...)
par(old.par)
}
if(3 %in% graph & !is.null(x$Rsquare)){
# there is no Rsquare for sensitivity analysis
if(dev.cur() == 1 | dev.interactive()) dev.new();
old.par <- par(no.readonly = TRUE)
## Dynamic coefficient of determination
plot(x$Rsquare,
ylim=c(0,1),
ylab="Rsquare",
type=type,
...)
par(old.par)
}
}
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