| aicw | Akaike weights |
| ancestral | Estimation of traits ancestral states. |
| coef.mvgls | Extract multivariate gls (or ols) model coefficients |
| effectsize | Multivariate measure of association/effect size for objects... |
| EIC | Extended Information Criterion (EIC) to compare models fit... |
| estim | Ancestral states reconstructions and missing value imputation... |
| fitted.mvgls | Extract multivariate gls (or ols) model fitted values |
| GIC | Generalized Information Criterion (GIC) to compare models fit... |
| halflife | The phylogenetic half-life for an Ornstein-Uhlenbeck process |
| LRT | Likelihood Ratio Test |
| manova.gls | Multivariate Analysis of Variance |
| mvBM | Multivariate Brownian Motion models of continuous traits... |
| mvEB | Multivariate Early Burst model of continuous traits evolution |
| mvgls | Fit linear model using Generalized Least Squares to... |
| mvgls.dfa | Discriminant Function Analysis (DFA) - also called Linear... |
| mvgls.pca | Principal Component Analysis (PCA) based on GLS (or OLS)... |
| mvLL | Multivariate (and univariate) algorithms for log-likelihood... |
| mvMORPH-package | Multivariate Comparative Methods for Fitting Evolutionary... |
| mvols | Fit linear model using Ordinary Least Squares to multivariate... |
| mvOU | Multivariate Ornstein-Uhlenbeck model of continuous traits... |
| mvOUTS | Multivariate continuous trait evolution for a stationary time... |
| mv.Precalc | Model parameterization for the various mvMORPH functions |
| mvqqplot | Quantile-Quantile plots for multivariate models fit with... |
| mvRWTS | Multivariate Brownian motion / Random Walk model of... |
| mvSHIFT | Multivariate change in mode of continuous trait evolution |
| mvSIM | Simulation of (multivariate) continuous traits on a phylogeny |
| pairwise.contrasts | Pairwise contrasts |
| pairwise.glh | Pairwise multivariate tests between levels of a factor |
| phyllostomid | Phylogeny and trait data for a sample of Phyllostomid bats |
| predict.mvgls | Predictions from (multivariate) gls or ols model fit |
| predict.mvgls.dfa | Predictions from Discriminant analysis conducted with a mvgls... |
| pruning | Pruning algorithm to compute the square root of the... |
| residuals.mvgls | Extract gls (or ols) model residuals |
| stationary | The stationary variance of an Ornstein-Uhlenbeck process |
| vcov.mvgls | Calculate variance-covariance matrix for a fitted object of... |
