movG-class: Class "movG"

In mvngGrAd: Moving Grid Adjustment in Plant Breeding Field Trials

Class "movG"

Description

The "movG" Class Represents Objects From A Moving Grid Adjustment Using A Designed Grid

Rdversion

1.1

Objects from the Class

Objects can be created by calls of the form new("movG", ...) or by a call to function movingGrid.

Slots

movingMeanMap:

Object of class "matrix" for the moving mean of the cell in the ith row and jth column.

row:

Object of class "integer" for the row subscripts.

col:

Object of class "integer" for the column subscripts.

observedPhe:

Object of class "numeric" for the observed phenotypic values.

adjustedPhe:

Object of class "numeric" for the adjusted phenotypic values.

movingMean:

Object of class "numeric" for the moving means.

nValues:

Object of class "integer" for the number of non-NA values used for calculating the moving mean.

adjModel:

Object of class "lm" for the model used for covariate adjustment.

correlation:

Object of class "numeric" for the coefficient of correlation between the moving means and the observed phenotypic values.

maxValues:

Object of class "integer" for the maximum number of values possible given the design of the grid or the number of nearest neighbors.

FunCall:

Object of class "call" for the function call.

Methods

entryData

signature(object = "movG"): extract all relevant information on each entry from the object

movingMean

signature(object = "movG"): extract only the moving means from the object

fitted

signature(object = "movG"): extract only the adjusted phenotypical values

residuals

signature(object = "movG"): extract the residuals from the model for calculation of the regression coefficient

show

signature(object = "movG"): show some summary statistics and informations

summary

signature(object = "movG"): same as show, but with a list of the summarized values invisibly returned

Note

The data in the slots observedPhe, adjustedPhe, movingMean, and nValues must correspond.

Author(s)

Frank Technow

See Also

movingGrid

Examples

showClass("movG")

mvngGrAd documentation built on Oct. 10, 2023, 1:08 a.m.