inst/NEWS.md

In neat: Efficient Network Enrichment Analysis Test

neat 1.2.4

• Released: January 2024
• This update aims to fix CRAN’s checks note “Package vignette without corresponding tangle output: ‘neat.Rmd’”
• Added package logo to vignette
• Updated CITATION file (replaced citEntry() with bibentry() as per CRAN note)

neat 1.2.3

• Released: January 2021
• Added index to the Vignette and changed the VignetteIndexEntry
• Updated package URL in DESCRIPTION file
• Updated article URL in CITATION file

neat 1.2.2

• Released: October 2020

Minor updates in the package DESCRIPTION file:

• Updated mantainer’s email address
• Updated URLs associated to the package
• Authorship information updated using Authors@R format
• Added link to ORCID

neat 1.2.1

• Released: January 2020
• The main change introduced from this version is the automatic computation of a multiple testing correction within the neat function. This is done through the specification of an extra argument, mtc.type, whose default value computes the FDR multiple testing correction. An extra column called adjusted_p has been added to the output of neat. The summary.neat function now returns summaries based on adjusted_p (and not any more based on pvalue)
• Another technical change introduced concerns the way in which class checks are performed within all package functions, so as to get ready to the changes that will be introduced from R 4.0.0 (see https://developer.r-project.org/Blog/public/2019/11/09/when-you-think-class.-think-again/index.html).

neat documentation built on June 22, 2024, 11:26 a.m.