Man pages for neonUtilities
Utilities for Working with NEON Data

assignClassesAssign correct column classes
byFileAOPSerially download all AOP files for a given site, year, and...
byTileAOPDownload AOP tiles overlapping specified coordinates for a...
chem_bundlesBundled chemistry data product information
cleanUpClean up folder after stacking
convByteSizeConvert a number of bytes into megabytes or gigabytes
dateConvertConvert date stamps from character
eddyStampCheckConvert date stamps from character and check for only one...
findDatatablesFind data tables
findTablesByFormatFind unique data tables in dataset
findTablesUniqueFind unique data tables in dataset
footRasterExtract eddy covariance footprint data from HDF5 format
getAPIGet the data from API
getAPIHeadersGet only headers from API
getAvgGet a list of the available averaging intervals for a data...
getDatatableGet NEON data table
getEddyLogGet the full issue log set for the SAE bundle
getFileUrlsGet and store the file names, S3 URLs, file size, and...
getIssueLogGet the issue log for a specific data product
getNeonDOIGet either a list of NEON DOIs, or the DOI for a specific...
getPackageGet NEON data package
getProductInfoGet NEON data product information
getProductSensorsGet data product-sensor relationships
getReadmePublicationDateScrape the publication date from each ReadMe file
getRecentPublicationReturns the most recent files for those that do not need...
getTaxonTableGet NEON taxon table
getTileUrlsGet and store the file names, S3 URLs, file size, and...
getTimeIndexGet a list of the available time intervals for a data product
getTitleGet NEON data product title
getVariablesGet correct data types
getVarsEddyExtract list of eddy covariance tables from HDF5 files
getZipUrlsGet and store the file names, S3 URLs, file size, and...
listFilesInZipGet a data frame with the names of all files within a zipped...
listZipfilesGet all zip file names within a zipped NEON data package
loadByProductGet files from NEON API, stack tables, and load into the...
makePosColumnsCreate position (horizontal and vertical) columns
other_bundlesBundled vegetation and sediment data product information
quietMessagesWill suppress all output messages, while retaining the output...
readTableNEONRead a NEON data table with correct data types for each...
shared_aquaticTerrestrial-aquatic shared data information
shared_flightsFlight coverage information
stackByTableJoin data files in a zipped NEON data package by table type
stackDataFilesParallelJoin data files in a unzipped NEON data package by table type
stackEddyExtract eddy covariance data from HDF5 format
stackFromStoreSelect files from a stored set of NEON data, created by...
table_typesPublication table information
transformFileToGeoCSVTransform NEON CSV file to GeoCSV
unzipZipfileParallelUnzip a zip file either at just the top level or recursively...
zipsByProductGet files from NEON API to feed the stackByTable() function
zipsByURIGet files from NEON ECS Bucket using URLs in stacked data
neonUtilities documentation built on April 15, 2022, 1:06 a.m.