plot.simGeno: Plot function for 'S3' class '"simgeno"'

In netgwas: Network-Based Genome Wide Association Studies

Plot function for S3 class "simgeno"

Description

Visualizes the pattern of the true graph, the adjacency matrix, precison matrix and the covariance matrix of the simulated data.

Usage

## S3 method for class 'simgeno'
plot(x, layout = layout.fruchterman.reingold, ...)

Arguments

x	An object of S3 class "simgeno", from function simgeno.
layout	The default is "layout.fruchterman.reingold".
...	System reserved (No specific usage)

Author(s)

Pariya Behrouzi and Ernst C. Wit
Maintainer: Pariya Behrouzi [e-mail]

References

Behrouzi, P., and Wit, E. C. (2017c). netgwas: An R Package for Network-Based Genome-Wide Association Studies. arXiv preprint, arXiv:1710.01236.

See Also

simgeno

Examples

## Not run: 
# Generating discrete ordinal data with "genome-like" graph structure
data.sim <- simgeno(alpha = 0.01, beta = 0.02)
plot( data.sim )

## End(Not run)

netgwas documentation built on Aug. 7, 2023, 5:10 p.m.