noise-package: Estimation of Intrinsic and Extrinsic Noise from Single-Cell...

In noise: Estimation of Intrinsic and Extrinsic Noise from Single-Cell Data

Description

Functions to calculate estimates of intrinsic and extrinsic noise from the two-reporter single-cell experiment, as in Elowitz, M. B., A. J. Levine, E. D. Siggia, and P. S. Swain (2002) Stochastic gene expression in a single cell. Science, 297, 1183-1186. Functions implement multiple estimators developed for unbiasedness or min Mean Squared Error (MSE) in Fu, A. Q. and Pachter, L. (2016). Estimating intrinsic and extrinsic noise from single-cell gene expression measurements. Statistical Applications in Genetics and Molecular Biology, 15(6), 447-471.

Details

The DESCRIPTION file: This package was not yet installed at build time.

Index: This package was not yet installed at build time.
~~ An overview of how to use the package, including the most important ~~ ~~ functions ~~

Author(s)

Audrey Qiuyan Fu and Lior Pachter

Maintainer: Audrey Q. Fu <[e-mail]>

References

Fu, A. Q. and Pachter, L. (2016). Estimating intrinsic and extrinsic noise from single-cell gene expression measurements. arXiv:1601.03334.

See Also

elowitz_data yang_nl10 computeIntrinsicNoise computeExtrinsicNoise simulateSC

noise documentation built on Jan. 8, 2021, 2:04 a.m.