Man pages for o2plsda
Multiomics Data Integration

AtA	trans matrix * matrix
colsds	get the sd for a matrix
column_sums	get the total values for a matrix
dot-o2cv	do cross-validation with group factors
dot-pls	Partial least squares discriminant analysis
eigenmult	two matrix mutiplication
eigenthree	three matrix mutiplication
getMCCV_cpp	MCCV sampling
loadings	Extract the loadings from an O2PLS fit
loadings.o2plsda	extract the loading value from the O2PLSDA analysis
loadings.plsda	extract the loading value from the PLSDA analysis
o2cv	Cross validation for O2PLS
o2pls	fit O2PLS model with best nc, nx, ny
O2pls-class	Class "O2pls" This class represents the Annotation...
opls	orthogonal scores algorithn of partial leat squares (opls)...
oplsda	Orthogonal partial least squares discriminant analysis
order_cpp	order a vector
order_str	order a vector of sting
plot.O2pls	Score or loading plot for the O2PLS results
plot.o2plsda	Score, VIP or loading plot for the O2PLS results
plot.plsda	Score, VIP or loading plot for the plsda results
plsda	Partial least squares discriminant analysis
print.O2pls	Print the summary of O2PLS results.
print.plsda	Print the summary of plsda results.
Q	calcualte the Q value
rcpp_rmse	calculate RMSE
s2	sum square of a matrix
sample_cpp	sampling a vector
sample_lapply	lapply sampling
scores	Extract the scores from an O2PLS fit
scores.O2pls	Extract the scores from an O2PLS fit
scores.o2plsda	Extract the scores from an O2PLS DA analysis
scores.plsda	Extract the scores PLSDA analysis
sort_str	sort string
split_str	split a vector
summary.O2pls	Summary of an O2PLS object
summary.plsda	Summary of an plsda object
unlist_cpp	unlist a list
vip	Extract the VIP values from the O2PLS-DA object