Files in odin

ODE Generation and Integration

NEWS.md README.md R/generate_r.R R/dependencies.R R/odin_preprocess.R R/ir_parse_config.R R/odin_package.R R/compat.R R/ir_parse.R R/generate_c_compiled.R R/ir_parse_arrays.R R/common.R R/wrapper.R R/odin_validate.R R/ring_cache.R R/odin_parse.R R/ir_validate.R R/generate_c_support.R R/misc.R R/generate_c_equation.R R/ir_substitute.R R/generate_c.R R/generate_r_sexp.R R/generate_r_class.R R/can_compile.R R/generate_c_utils.R R/odin_options.R R/zzz.R R/generate_r_equation.R R/ir_parse_error.R R/odin_build.R R/generate_r_support.R R/generate_c_sexp.R R/ir_deserialise.R R/opt.R R/generate_r_utils.R R/interface.R R/ir_serialise.R R/odin.R R/utils.R R/support.R inst/doc/discrete.Rmd inst/doc/functions.Rmd inst/doc/odin.Rmd inst/doc/functions.R inst/doc/discrete.R inst/doc/odin.R inst/examples/discrete_stochastic_seirds.R inst/examples/lorenz.R inst/examples/discrete_deterministic_sir.R inst/examples/logistic.R inst/examples/discrete_stochastic_sir.R inst/examples/discrete_stochastic_sir_arrays.R inst/examples/package/inst/odin/lorenz.R inst/template/odin_c.R tests/testthat.R tests/testthat/test-parse2-interpolation.R tests/testthat/test-run-general.R tests/testthat/test-parse2-general.R tests/testthat/test-run-stochastic.R tests/testthat/test-opt.R tests/testthat/test-parse2-delay.R tests/testthat/helper-parse.R tests/testthat/test-odin-validate.R tests/testthat/helper-examples.R tests/testthat/test-parse2-unused.R tests/testthat/test-parse2-rewrite.R tests/testthat/helper-package.R tests/testthat/test-odin-build.R tests/testthat/test-generate-r.R tests/testthat/test-preprocess.R tests/testthat/test-support.R tests/testthat/test-run-delay-continuous.R tests/testthat/test-ring-cache.R tests/testthat/test-odin-options.R tests/testthat/test-parse-inplace.R tests/testthat/test-can-compile.R tests/testthat/test-run-interpolation.R tests/testthat/test-run-regression.R tests/testthat/test-util.R tests/testthat/test-run-delay-discrete.R tests/testthat/test-ir.R tests/testthat/user_fns.R tests/testthat/test-run-library.R tests/testthat/test-parse2-stochastic.R tests/testthat/test-package.R tests/testthat/test-interface.R tests/testthat/test-run-examples.R tests/testthat/test-generate-c.R tests/testthat/test-run-discrete.R tests/testthat/test-parse2-config.R tests/testthat/helper-discrete.R tests/testthat/helper-odin.R tests/testthat/test-run-basic.R tests/testthat/examples/interpolate_odin.R tests/testthat/examples/interpolate_deSolve.R tests/testthat/examples/lorenz_odin.R tests/testthat/examples/lorenz_deSolve.R tests/testthat/examples/sir_odin.R tests/testthat/examples/seir_array_odin.R tests/testthat/examples/array_2d_odin.R tests/testthat/examples/seir_array_deSolve.R tests/testthat/examples/lv4_deSolve.R tests/testthat/examples/array_odin_user3.R tests/testthat/examples/seir_odin.R tests/testthat/examples/sir_deSolve.R tests/testthat/examples/array_odin_user2.R tests/testthat/examples/array_deSolve.R tests/testthat/examples/array_odin_user.R tests/testthat/examples/array_odin.R tests/testthat/examples/seir_deSolve.R tests/testthat/examples/lv4_odin.R tests/testthat/stochastic/sir_discrete_stochastic_multi.R tests/testthat/stochastic/sir_discrete.R tests/testthat/stochastic/sir_discrete_stochastic2.R tests/testthat/stochastic/sir_discrete_stochastic.R tests/testthat/pkg/inst/odin/pulse.R tests/testthat/pkg/inst/odin/discretedelay.R vignettes/discrete.Rmd vignettes/functions.Rmd vignettes/odin.Rmd man/odin_build.Rd man/can_compile.Rd man/odin.Rd man/odin_validate.Rd man/odin_options.Rd man/odin_package.Rd man/odin_ir.Rd man/odin_parse.Rd man/odin_ir_deserialise.Rd