GTExsmall: Small Subset of GTEx Dataset

In omicwas: Cell-Type-Specific Association Testing in Bulk Omics Experiments

Description

The dataset includes gene expression measured in whole blood for 389 samples. A subset of 500 genes were randomly selected from the original dataset.

Usage

data(GTExsmall)

Format

An object of class list of length 4.

Source

GTEx

See Also

ctassoc

Examples

data(GTExsmall)
X = GTExsmall$X
W = GTExsmall$W
Y = GTExsmall$Y + 1
Y = Y[seq(1, 20), ] # for brevity
C = GTExsmall$C
result = ctassoc(X, W, Y, C = C)
result$coefficients

omicwas documentation built on Jan. 13, 2021, 8:48 a.m.