Man pages for openVA
Automated Method for Verbal Autopsy
| codeVA | Running automated method on VA data |
| ConvertData | Converting Input data with different coding scheme to... |
| ConvertData.phmrc | Convert standard PHMRC data into binary indicator format |
| csmf_eava | Calculate CSMF from EAVA::codEAVA output |
| DataEAVA | 1,736 records of Sample Input |
| getCCC | Calculate Overall chance-corrected concordance (CCC) |
| getCSMF | Obtain CSMF from fitted model |
| getCSMF_accuracy | Calculate CSMF accuracy |
| getIndivProb | Extract individual distribution of cause of death |
| getPHMRC_url | Get the URL to the PHMRC dataset |
| getTopCOD | Extract the most likely cause(s) of death |
| grouping_eava_child | Mapping for child causes of death to the list used by the... |
| grouping_eava_neonate | Mapping for neonate causes of death to the list used by the... |
| interVA_train | Extended InterVA method for non-standard input |
| NeonatesVA5 | 200 records of Sample Input |
| openVA_status | Check openVA packages status |
| openVA_update | Update openVA packages |
| plot.eava | Create CSMF plot for EAVA::codEAVA output |
| plotVA | Plot top CSMF for a fitted model |
| plot.vacalibration | Plot CSMF from a vacalibration object |
| prepCalibration | Convert the assigned causes to the format expected by... |
| print.eava | Print method for "eava" class. |
| print.eava_summary | Print method for summarizing results from EAVA algorithm. |
| print.vacalibration | Print method for vacalibration model fits |
| print.vacalibration_summary | Print method for summarizing vacalibration results |
| RandomVA6 | 1,736 records of Sample Input |
| reexports | Objects exported from other packages |
| stackplotVA | plot grouped CSMF from a "insilico" object |
| summary.eava | Summary of results obtained by fitting the EAVA algorithm. |
| summary.vacalibration | Summary of results obtained by vacalibration |
