optBiomarker: Estimation of optimal number of biomarkers for two-group microarray based classifications at a given error tolerance level for various classification rules

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Estimates optimal number of biomarkers for two-group classification based on microarray data

Author
Mizanur Khondoker <mizanur.khondoker@gmail.com>
Date of publication
2013-07-11 07:37:56
Maintainer
Mizanur Khondoker <mizanur.khondoker@gmail.com>
License
GPL (>= 2)
Version
1.0-27

View on CRAN

Man pages

classificationError.data.frame
Estimation of misclassification errors (generalisation...
errorDbase
Database of leave-one-out cross validation errors for various...
internal
Internal functions for optBiomarker package.
optBiomarker-package
R package for estimating optimal number of biomarkers at a...
optimiseBiomarker
Estimates optimal number of biomarkers at a given error...
realBiomarker
A set of 54359 median gene expressions in log (base 2) scale
simData
Simulation of microarray data

Files in this package

optBiomarker
optBiomarker/MD5
optBiomarker/man
optBiomarker/man/simData.Rd
optBiomarker/man/realBiomarker.Rd
optBiomarker/man/optimiseBiomarker.Rd
optBiomarker/man/optBiomarker-package.Rd
optBiomarker/man/internal.Rd
optBiomarker/man/errorDbase.Rd
optBiomarker/man/classificationError.data.frame.Rd
optBiomarker/inst
optBiomarker/inst/doc
optBiomarker/inst/doc/optBiomarker-screenshot.pdf
optBiomarker/data
optBiomarker/data/realBiomarker.RData
optBiomarker/data/errorDbase.RData
optBiomarker/R
optBiomarker/R/simData.R
optBiomarker/R/optimiseBiomarker.R
optBiomarker/R/internal.R
optBiomarker/R/classificationError.data.frame.R
optBiomarker/NAMESPACE
optBiomarker/DESCRIPTION