Description Usage Arguments Details Value Note Author(s) References See Also Examples
In it's simplest form simply reassigns cluster numbers in an existing classification to re-order tables and graphs. Can also be used to combine clusters into a fewer number of clusters.
1 | reordclust(clustering,from,to)
|
clustering |
a vector of (interger) cluster mmeberships, or an object of class ‘clustering’, ‘partana’, or ‘partition’ |
from |
an integer vector equal in length to the number of clusters that specifies the current clusters |
to |
an integer vector equal in length to the number of clusters that specifies the clusters the current clusters map to |
The function simply maps cluster numbers in the ‘from’ vector to the respective cluster number in the ‘to’ vector.
an object of class ‘clustering’
As demonstrated in the examples below, reordclass can also combine existing clusters into fewer clusters while reordering if more than one cluster in the ‘from’ vector maps to the same cluster in the ‘to’ cluster.
David W. Roberts droberts@montana.edu
http://ecology.msu.montana.edu/labdsv/R
1 2 3 4 5 6 7 | data(shoshveg)
dis.bc <- dsvdis(shoshveg,'bray')
opt.10 <- optpart(10,dis.bc)
new <- reordclust(opt.10,1:10,c(1,3,5,7,9,2,4,6,8,10))
# simply re-ordered
new2 <- reordclust(opt.10,1:10,c(1,1,2,2,3,3,4,4,5,5))
# merge 1 and 2 into 1, 3 and 4 into 2, etc.
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